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Protein Overview: CG8289-PA

General Information:
Name(s) found: CG8289-PA / FBpp0074258 [FlyBase]
Description(s) found:
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  • gi|7293368|gb|AAF48746.1| CG8289 [Drosophila melanogaster] [NCBI NR]
  • gi|18859937|ref|NP_573229.1| CG8289 [Drosophila melanogaster] [NCBI NR]
  • gi|15292051|gb|AAK93294.1| LD36501p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8289 (CG8289, FBgn0030854). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:17527724..17530075. It has the cytological map location 16B10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: chromatin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: chromatin assembly or disassembly. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG8289-PA translation from_gene[CG8289 CG8289 FBgn0030854] seq_release:3 mol_weight=37383 cds_boundaries:(X:17,365,294..17,366,885[-]) aa_length:336 transcript_info:[CG8289-RA seq_release:3] gene_info:[gene symbol:CG8289 FBgn0030854 gene_boundaries:(X [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VX35) CG8289 protein (LD36501P) [DrosMelano7227.FASTAC.txt]
  • (AE003506) CG8289 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG8289-PA [Drosophila melanogaster]gi|15292051|gb|AAK93294.1| LD36501p [Drosophila melanogaster]gi|18859937|ref|NP_573229.1| CG8289-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(17528365..17528386,17528607..17529010,17529375..17529959); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB [fly-100309-contam.fasta]
  • CG8289-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD36501p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(17528365..17528386,17528607..17529010,17529375..17529959); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB_protein:AAF48746; MD5=4733706f796013b91c5a11288602ca92; length=336; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(17528365..17528386,17528607..17529010,17529375..17529959); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB_protein:AAF48746; MD5=4733706f796013b91c5a11288602ca92; length=336; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG8289 OS=Drosophila melanogaster GN=CG8289 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(17528365..17528386,17528607..17529010,17529375..17529959); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB_protein:AAF48746,FlyMine:FBpp0074258,modMine:FBpp0074258; MD5=4733706f796013b91c5a11288602ca92; length=336; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG8289 OS=Drosophila melanogaster GN=CG8289 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=X:complement(join(17635342..17635926,17634574..17634977,17634332..17634353)); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB_protein:AAF48746,FlyMine:FBpp0074258,modMine:FBpp0074258; MD5=4733706f796013b91c5a11288602ca92; length=336; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(17635342..17635926,17634574..17634977,17634332..17634353)); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB_protein:AAF48746,FlyMine:FBpp0074258,modMine:FBpp0074258; MD5=4733706f796013b91c5a11288602ca92; length=336; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG8289, isoform A OS=Drosophila melanogaster GN=CG8289 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0074258 type=protein; loc=X:complement(join(17635342..17635926,17634574..17634977,17634332..17634353)); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB_protein:AAF48746,FlyMine:FBpp0074258,modMine:FBpp0074258; MD5=4733706f796013b91c5a11288602ca92; length=336; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(join(17635342..17635926,17634574..17634977,17634332..17634353)); ID=FBpp0074258; name=CG8289-PA; parent=FBgn0030854,FBtr0074484; dbxref=FlyBase:FBpp0074258,FlyBase_Annotation_IDs:CG8289-PA,GB_protein:AAF48746.1,REFSEQ:NP_573229,GB_protein:AAF48746,UniProt/TrEMBL:Q9VX35,FlyMine:FBpp0074258,modMine:FBpp0074258; MD5=4733706f796013b91c5a11288602ca92; length=336; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 336 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    chromatin [IEA]
    Biological Process: chromatin assembly or disassembly [IEA]
    Molecular Function: chromatin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKASKKVAE SKRRNGVANE SENEEIDQQK SNGTGRSSRK TPNKRKAKLT VASDSEDSDC  60
   61 QTSTSNVDVP AARNKRKVGK ARNATTSPRK NGKKIVIEDS DDDANHSDVD PSADSSPRKP 120
  121 NIKRQTRRSV RGETEDSNEL PSTSKASAHA SSPIKKRKLS RASTSSVKNG KKVAEKDSES 180
  181 DVDAGTEDEK SAQPQKVAAK SKSSPNAKKA KGRGRRNAGT KKADDSIDPE KQWEVEKILD 240
  241 HVATKEGDMF KIRWKKYGPK DDSWEPSKNL ACDALIEKFM RKQATQENVD VKELRESPKK 300
  301 TERLVDECYP RTNLHNRIER SSKRSSAKNR IFYGEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] deduced N/A No confident structure predictions are available.
    2 View Details [109..222] FFAS03 1.19 No description for 2j63A was found.
    3 View Details [223..336] PSI-BLAST 6.30103 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.374364652893655 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle