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Protein Overview: mRpL43-PA

General Information:
Name(s) found: mRpL43-PA / FBpp0071993 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene mitochondrial ribosomal protein L43 is referred to in FlyBase by the symbol Dmel\mRpL43 (CG5479, FBgn0034893). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19585631..19586537. It has the cytological map location 59F6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 192 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSHLFLKS GFPRAPLQNG LGRYVCQLQR ITLKFCKNNG SSRGMRDFIE NHLLDFAKEN  60
   61 PGIVVYVKPR RHRTPVLVGE YLNGEREWMS CRNSTQEEIS KWIDLLKTQN GSSSSLRLRK 120
  121 MWHTEVPSIQ GPWTPFLLRS PDAQGQAYPS AEASKPLDTP QTATEKLIEL FRQQQLEAGE 180
  181 EAHDVLNKKR AE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 26.69897 NMR Solution Structure of Subunit B8 from Human NADH-Ubiquinone Oxidoreductase Complex I (CI-B8)
    2 View Details [115..192] MSA 1.029994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.75944406275714 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  1.67491903098311 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  1.51076265708524 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  1.38563210321556 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.05291982801016 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  0.7678907195493 bayes_pls_golite062009
  • binding
    		•  0.680816432660797 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.364698672137451 bayes_pls_golite062009
  • protein binding
    		•  0.341730456502484 bayes_pls_golite062009
    		• 0.0102370745096865 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle