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Protein Overview: CG17386-PA, FBpp...

General Information:
Name(s) found: FBpp0311633 [FlyBase]
CG17386-PA / FBpp0086617 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=2R:10308544..10311147; ID=FBpp0311633; name=CG17386-PB; parent=FBgn0033936,FBtr0345529; dbxref=FlyBase:FBpp0311633,FlyBase_Annotation_IDs:CG17386-PB; MD5=6f395670e11b725073217128ec955164; length=867; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17386 (CG17386, FBgn0033936). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10307846..10312099. It has the cytological map location 51A2. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 867 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPRDKAEQ VYEVKAPHAG AEGHTFLVSP VDPTPILAPI LTAVPVMKAP DSPASMDKTK  60
   61 EMEELDDEQP SCSSQAVVPL SSSLPCKLLR MHARRSAQAL LHQMESMDSQ LGSSNGSTSE 120
  121 DTSPSAPPMS PTDHQLVDVG MGSSIGDSDE SSEEGDELKP LAVDNHIIAE VDLTERQTTP 180
  181 PAVLSEANLE KFRKHQMDNI YLHPNFTLDA SPPPAVAPAN SPVLEAKRTH RSFLTMKKEK 240
  241 EVEPPQEKEQ EVPVHQEQDT EPQGPNEIDT LDPSLIPSEE LAAEITDAVE FYFSNESILK 300
  301 DAFLLKHVRR NKEGFVSLKL VSSFKRVRQL TREWKVVGDA VRRKSRKIEL NDVGTKVRRI 360
  361 EPLPSFDETM PSRTIVACDL PLDKLTIEKV SDLFSPCGEI ALIRILKPGM AIPVDVRQFM 420
  421 NKYPELQQKE CALVEYLESS SARDARHLNG PFQVYEMVAP KKKTGKKAAV IQIAAPVARM 480
  481 VENYRYYNDA NYERSRGGSF SGHETVPDLR FKLKRNNSDF QPSYYQQTGP SYHANPYQHY 540
  541 QPRGSIGNQN QEVGPNGFFG YGPRRYSNTS TISANTAAAL GDVSPISSAV NSGGNPMVSG 600
  601 ISSLQRRLSN CSEQNYTPEV NPSMSRRASN CSETGGVPQR RDSNCSESCP CSRRVSDFAQ 660
  661 TTDTSYRKTS VCSNGSCPGN NQNQERRFSN GSMQFERTFS NASESSGFYR RPSNDFNIER 720
  721 EPIQTDQLVG GGGGGYQVWP RRYSNNFQQL SSKLAAYDNA QYIGGRRIST DSGYDRRCSF 780
  781 GSEGFEGSPR SRTGSFLSNY KHGGGDGYDG QPRSRTGSFL DGSPRSRSGS FAQRAAESLV 840
  841 RTPMGPDGSK GFGQRARKFG QTISPVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] MSA 3.164996 View MSA. No confident structure predictions are available.
    2 View Details [208..276] deduced N/A No confident structure predictions are available.
    3 View Details [277..483] PSI-BLAST 32.0 Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen
    4 View Details [484..637] FFAS03 1.11 CRYSTAL STRUCTURE OF THE DIMERIC SH2 DOMAIN OF APS
    5 View Details [638..781] MSA 5.134996 View MSA. No confident structure predictions are available.
    6 View Details [782..867] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
    		•  0.322032621007217 bayes_pls_golite062009
  • protein binding
    		•  0.148876511909407 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle