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Protein Overview: gi|123999658, gi...

General Information:
Name(s) found: gi|123999658 [NCBI NR]
gi|123992846 [NCBI NR]
Description(s) found:
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  • gi|123999658|gb|ABM87370.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic construct] [NCBI NR]
  • gi|123992846|gb|ABM84025.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 109 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVVGVSSVS RLLGRSRPQL GRPMSSGAHG EEGSARMWKT LTFFVALPGV AVSMLNVYLK  60
   61 SHHGEHERPE FIAYPHLRIR TKPFPWGDGN HTLFHNPHVN PLPTGYEDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 28.69897 Mitochondrial cytochrome c oxidase subunit VIa

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  0.43268723383487 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.43268723383487 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.43268723383487 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.280428750542101 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.13082545919054 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.04800265254548 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle