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Protein Overview: gi|19113470

General Information:
Name(s) found: gi|19113470 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|19113470|ref|NP_596678.1| hypothetical protein SPBC3B9.20 [Schizosaccharomyces pombe 972h-] [NCBI NR]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 827 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLASLIKT KLKLPDSSKN LNKLRWKFRL LESQFALYSL PCQLRFVHYN NLEDPNSFNG  60
   61 LLYLFTDYIA FQGDDESNQF CMPYTIIRKV SRVKSNDLEQ LLSVSTSNGY EYRISLQVSE 120
  121 TTAAHFCQLL REELVSHKAD MQRSSEFSKQ FFSERLCKPN VPEPETKDSY GFGARYGYPT 180
  181 DPRISRERAK LRMWKEYFLL YGANLSLIRV SLFSKLVRIE LPNKLRGEIW ELTSGSMYFR 240
  241 LENSDEYDHL LKVYSGQTSF SLEEIEKDLG RSLPEYPAYQ NEEGINALRN VLVAFSWKNQ 300
  301 EVGYCQAMNI VAAALLIHCT EEQTFFLMHK ICEDYIPGYY SKTMYGTLID QQVYESLVQR 360
  361 SMPNLHAHFV SKDIQLSIIS LPWFLSLFLC TMPLPYAFRL LDFFFLEGPR VLFQIGMAIL 420
  421 YDNEAEIMKA TEDTMLISIL KNYFSSLGDK AYKDATDKRV ASITKFQLLL VTAFKKFSHI 480
  481 THSLIEDERK KHYEGVMNSI ESFAKRTQIR SLQNYGTLTR TDLSNIYDRY HEVLSSKHRV 540
  541 GLGSSTDTRL EFDEFCIFLA GVTEWAKGLD AAAINNSSSF LRHLFLRFDK SMTGSLSLQD 600
  601 LVSGIAELKF RDVMRNISFI FELYDFNGDG FMDKPDVLKV SEAILWLTRF MGDEYLSAVS 660
  661 EFIQRCFHFA DEASPDGHSD TLIDISDHMS STGSENRSVG ANSDIKVSLP TFRMVVLSIG 720
  721 LLEQLFSGGL ADSIVLAPVQ EKSSTTGGLR GLLDSLVIDT NRIGKTFRGH KPASRPSTAN 780
  781 GTSNQNTTSE ITTSETTATE KTPSNSSDTE DDVGDVVEND KDLLQFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] FFAS03 1.22 No description for 2cayA was found.
    2 View Details [157..279] PSI-BLAST 46.39794 No description for 2qq8A was found.
    3 View Details [280..372] PSI-BLAST 4.69897 No description for 2jc6A was found.
    4 View Details [373..728] PSI-BLAST 5.39794 Crystal Structure analysis of rat m-calpain mutant Lys10 Thr
    5 View Details [729..827] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.80886147441069 bayes_pls_golite062009
  • protein binding
    		•  0.845590096724432 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.82196777541585 bayes_pls_golite062009
  • calcium ion binding
    		•  0.326789035157241 bayes_pls_golite062009
  • ion binding
    		•  0.228888934051136 bayes_pls_golite062009
  • cation binding
    		•  0.227323129980928 bayes_pls_golite062009
  • metal ion binding
    		•  0.227323129980928 bayes_pls_golite062009
  • protein binding
    		•  0.0504192768094249 bayes_pls_golite062009
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.44

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle