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Protein Overview: SYY_YERPN

General Information:
Name(s) found: SYY_YERPN [Swiss-Prot]
Description(s) found:
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  • gi|229902297|ref|ZP_04517417.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|229680632|gb|EEO76728.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|122980157|sp|Q1CIM5.1|SYY_YERPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS [NCBI NR]
  • gi|108811988|ref|YP_647755.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108775636|gb|ABG18155.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516] [NCBI NR]
  • Tyrosine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tyrS PE=3 SV=1 [Swiss-Prot]
  • tyrosyl-tRNA synthetase [Yersinia pestis Nepal516] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis Nepal516
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSNLIKQL QERGLVAQVT DEDALAERLA QGPISLYCGF DPTADSLHLG HLVPLLCLKR  60
   61 FQLAGHRPVA LVGGATGMIG DPSFKASERK LNTEDTVNEW VEKIRHQVSP FLDFDCGENS 120
  121 AIAANNYDWF GGMNVLTFLR DIGKHFSVNQ MINKEAVKQR LNRDDSGISF TEFSYNLLQA 180
  181 YDFACLNKNH GVALQIGGSD QWGNITSGID LTRRLHQQQV YGLTVPLITK ADGTKFGKTE 240
  241 GGAVWLDPKK TSPYKFYQFW INTADADVYR FLKFFTFMSL EEINALEEED KNSGKAPRAQ 300
  301 YVLAENVTGM VHGPEGLAAA KRITDSLFSG DLHDMTEADF AQLAQDGMPT VELNRDADLQ 360
  361 QALVNAELVP SRGQARTMIG SNAVAINGEK QADPEYVFTD ADRLFGRYTL LRRGKKHYCL 420
  421 ISWL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..327] PSI-BLAST 96.0 Tyrosyl t-RNA Synthetase from E.coli Complexed with Tyrosine
    2 View Details [328..424] PSI-BLAST 21.69897 Tyrosyl-trna synthetase (TyrRS), C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  4.38130670432475 bayes_pls_golite062009
  • structural molecule activity
    		•  4.02543122782129 bayes_pls_golite062009
  • binding
    		•  1.19763920760651 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.926923419656671 bayes_pls_golite062009
  • protein binding
    		•  0.255198885489521 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle