YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Shroom-PD, FBpp0...

General Information:
Name(s) found: FBpp0309010 [FlyBase]
Shroom-PD / FBpp0111526 [FlyBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • type=protein; loc=2R:join(10202829..10203038,10213355..10213590,10214313..10214677,10215222..10215984,10216057..10217053,10217138..10217319,10236897..10238352,10238416..10238673,10238742..10239005); ID=FBpp0309010; name=Shroom-PH; parent=FBgn0085408,FBtr0339991; dbxref=FlyBase:FBpp0309010,FlyBase_Annotation_IDs:CG34379-PH; MD5=8ed75c553d40944f68b45c5c8a724905; length=1576; release=r5.56; species=Dmel; [FlyBase]
  • The gene Shroom is referred to in FlyBase by the symbol Dmel\Shroom (CG34379, FBgn0085408). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10195667..10239312. It has the cytological map location 50F4-50F6. Based on sequence similarity, it is predicted to have molecular function</span>: actin binding. There is experimental evidence that it is involved in the biological process</span>: cell morphogenesis. 14 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1576 amino acids

    Gene Ontology:
    Cellular Component: tight junction [ISS]
    cytoskeleton [ISS]
    cortical actin cytoskeleton [IDA]
    plasma membrane [ISS]
    Biological Process: melanosome organization [ISS]
    cell morphogenesis [IDA]
    cell migration [ISS]
    Molecular Function: actin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRNHKENG NGSEMGESTK SLAKMEPENN NKISVVSVSK LLLKDSNGAN SRSSNSNASF  60
   61 SSASVAGSVQ DDLPHHNSSS SQLGQQHGSS LDQCGLTQAG LEEYNNRSSS YYDQTAFHHQ 120
  121 KQPSYAQSEG YHSYVSSSDS TSATPFLDKL RQESDLLSRQ SHHWSENDLS SVCSNSVAPS 180
  181 PIPLLARQSH SHSHSHAHSH SNSHGHSHGH AHSASSSSSS NNNSNGSATN NNNNNSSEST 240
  241 SSTETLKWLG SMSDISEASH ATGYSAISES VSSSQRIVHS SRVPTPKRHH SESVLYLHNN 300
  301 EEQGDSSPTA SNSSQMMISE EANGEESPPS VQPLRIQHRH SPSYPPVHTS MVLHHFQQQQ 360
  361 QQQQDYQHPS RHHTNQSTLS TQSSLLELAS PTEKPRSLMG QSHSMGDLQQ KNPHQNPMLG 420
  421 RSAGQQHKSS ISVTISSSEA VVTIAPQPPA GKPSKLQLSL GKSEALSCST PNMGEQSPTN 480
  481 SIDSYRSNHR LFPVSTYTEP VHSNTSQYVQ HPKPQFSSGL HKSAKLPVIT PAGATVQPTW 540
  541 HSVAERINDF ERSQLGEPPK FAYLEPTKTH RLSNPALKAL QKNAVQSYVE RQQQQQKEEQ 600
  601 QLLRPHSQSY QACHVERKSL PNNLSPIMVG LPTGSNSAST RDCSSPTPPP PPRRSGSLLP 660
  661 NLLRRSSSAS DYAEFRELHQ AQGQVKGPSI RNISNAEKIS FNDCGMPPPP PPPRGRLAVP 720
  721 TRRTSSATEY APMRDKLLLQ QAAALAHQQH HPQQHRHAQP PHVPPERPPK HPNLRVPSPE 780
  781 LPPPPQSELD ISYTFDEPLP PPPPPEVLQP RPPPSPNRRN CFAGASTRRT TYEAPPPTAI 840
  841 VAAKVPPLVP KKPTSLQHKH LANGGGGSRK RPHHATPQPI LENVASPVAP PPPLLPRARS 900
  901 TAHDNVIASN LESNQQKRSN SKASYLPRQS LEKLNNTDPD HGIYKLTLTS NEDLVAHTKP 960
  961 SYGVTGKLPN NLPDVLPLGV KLHQQPKLQP GSPNGDANVT LRYGSNNNLT GNSPTVAPPP1020
 1021 YYGGGQRYST PVLGQGYGKS SKPVTPQQYT RSQSYDVKHT SAVTMPTMSQ SHVDLKQAAH1080
 1081 DLETTLEEVL PTATPTPTPT PTPTPPRLSP ASSHSDCSLS TSSLECTINP IATPIPKPEA1140
 1141 HIFRAEVIST TLNTNPLTTP PKPAMNRQES LRENIEKITQ LQSVLMSAHL CDASLLGGYT1200
 1201 TPLITSPTAS FANEPLMTPP LPPSPPPPLE PEEEEEQEEN DVHDKQPEIE ELQLMQRSEL1260
 1261 VLMVNPKPST TDMACQTDEL EDRDTDLEAA REEHQTRTTL QPRQRQPIEL DYEQMSRELV1320
 1321 KLLPPGDKIA DILTPKICKP TSQYVSNLYN PDVPLRLAKR DVGTSTLMRM KSITSSAEIR1380
 1381 VVSVELQLAE PSEEPTNLIK QKMDELIKHL NQKIVSLKRE QQTISEECSA NDRLGQDLFA1440
 1441 KLAEKVRPSE ASKFRTHVDA VGNITSLLLS LSERLAQTES SLETRQQERG ALESKRDLLY1500
 1501 EQMEEAQRLK SDIERRGVSI AGLLAKNLSA DMCADYDYFI NMKAKLIADA RDLAVRIKGS1560
 1561 EEQLSSLSDA LVQSDC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle