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Protein Overview: NUSB_CAMJR

General Information:
Name(s) found: NUSB_CAMJR [Swiss-Prot]
Description(s) found:
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  • gi|73621331|sp|Q5HW85.1|NUSB_CAMJR RecName: Full=N utilization substance protein B homolog; Short=Protein nusB [NCBI NR]
  • gi|57237437|ref|YP_178450.1| transcription antitermination protein NusB [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57166241|gb|AAW35020.1| transcription antitermination factor NusB [Campylobacter jejuni RM1221] [NCBI NR]
  • N utilization substance protein B homolog OS=Campylobacter jejuni (strain RM1221) GN=nusB PE=3 SV=1 [Swiss-Prot]
  • transcription antitermination protein NusB [Campylobacter jejuni RM1221] [nr-271106-contam.fasta]
  • N utilization substance protein B homolog (Protein nusB) [nr-271106-contam.fasta]
  • transcription antitermination factor NusB [Campylobacter jejuni RM1221] [nr-271106-contam.fasta]
    • Organism: Campylobacter jejuni RM1221
    Length: 132 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription termination [ISSLink to PubMed article]
    Molecular Function: transcription termination factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRHQVRQS VISLLYAFEL NSQNNVFVDE ILDEKKIRNE QKNFTLNLYN GILDNLNNID  60
   61 ETLNSFLNDN QITALGHVER AILRLGAYEL LFTDTPSAIV INEAIELAKE LANDNSPKFI 120
  121 NGVLDALIKA KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 26.0 T. maritima NusB, P21

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription termination factor activity
    		•  7.08625510047476 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.63525538465601 bayes_pls_golite062009
  • binding
    		•  0.569728786489819 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle