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Protein Overview: gi|30685673

General Information:
Name(s) found: gi|30685673 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30685673|ref|NP_850208.1| arpc2b (actin-related protein C2B); structural molecule [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: Arp2/3 protein complex [TAS]
    Biological Process: actin filament organization [TAS]
    Molecular Function: structural molecule activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE  60
   61 TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL GLNLDNIPRG KEAIKIITRI 120
  121 SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF 180
  181 KDNSDVVIAT SFFQDMGKAP QCSWSPIPPL QLRGEPVQDL TTNSGFVSFD ITSRHIEGKR 240
  241 LDKTVWNLLN FYACAKYHIK CSRGYIQRRM RKRMETLVKL LNNTSLEEEA AQNENGRCKY 300
  301 VKEFVKVPKG KLMMKQRCKE MTRRVKISKF RIKINGCARF RFNQRWISLP KFSSKPSDKS 360
  361 YTKLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 122.0 ARPC2 (34 kDa subunit)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  6.0922573068519 bayes_pls_golite062009
  • actin filament binding
    		•  5.01990273175321 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  4.64781612293343 bayes_pls_golite062009
  • binding
    		•  2.16088008530271 bayes_pls_golite062009
  • protein binding
    		•  1.98253629760139 bayes_pls_golite062009
  • structural molecule activity
    		•  1.40122171600941 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  1.37010524302636 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle