Protein Overview: DNAJ_YERPE

General Information:
Name(s) found:	DNAJ_YERPE [Swiss-Prot]
Description(s) found: Found 5 descriptions. SHOW ALL	Chaperone protein DnaJ OS=Yersinia pestis GN=dnaJ PE=3 SV=1 [Swiss-Prot]
Organism:	Yersinia pestis
Length:	379 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRDYYEVL GVSRDAEERE IKKAYKRLAM KFHPDRQSED KNAEEKFKEA KEAYEILTDA  60
   61 QKRAAYDQYG HAAFEQGGMG GGGFGGGGGG ADFSDIFGDV FGDIFGGGRR QQRASRGSDL 120
  121 RYNMDLTLEE AVRGVTKEIR IPTLDECDVC HGSGAKPGSS PVTCPTCHGA GQVQMRQGFF 180
  181 TVQQACPHCH GRGQIIKDPC NKCHGHGRVE KSKTLSVKIP AGVDTGDRIR LSGEGEAGEH 240
  241 GAPSGDLYVQ VQVKAHPIFE REGNNLYCEV PINFAMAALG GEIEVPTLDG RVKLKIPAET 300
  301 QTGKMFRMRG KGVKSVRGGS QGDLLCRVVV ETPVSLSEKQ KQLLRELEES FVGAAGEKNS 360
  361 PRAKSFLDGV KKFFDDLTR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..115]	PSI-BLAST	25.045757	NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
2	View Details	[116..379]	PSI-BLAST	44.69897	The crystal structure of Hsp40 Ydj1

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
unfolded protein binding	3.04403163860617	bayes_pls_golite062009
heat shock protein binding	2.17994194200939	bayes_pls_golite062009
binding	2.03854863870179	bayes_pls_golite062009
chaperone binding	1.61155546076854	bayes_pls_golite062009
protein binding	1.35701123337504	bayes_pls_golite062009
transcription regulator activity	1.2131700498174	bayes_pls_golite062009
nucleic acid binding	1.12971478797926	bayes_pls_golite062009
DNA binding	0.8788643398536	bayes_pls_golite062009
Hsp70 protein binding	0.541755903922701	bayes_pls_golite062009
catalytic activity	0.106988907594358	bayes_pls_golite062009

2

Term	Confidence	Notes
protein disulfide isomerase activity	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups	2.23398279564144	bayes_pls_golite062009
binding	2.13705208493215	bayes_pls_golite062009
unfolded protein binding	2.04158808514315	bayes_pls_golite062009
protein binding	1.32690171510656	bayes_pls_golite062009
catalytic activity	0.276917867171685	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle