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Protein Overview: gi|52426104, gi|...

General Information:
Name(s) found: gi|52426104 [NCBI NR]
gi|52308156 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|52426104|ref|YP_089241.1| 30S ribosomal protein S10 [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
  • gi|52308156|gb|AAU38656.1| RpsJ protein [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
    • Organism: Mannheimia succiniciproducens MBEL55E
    Length: 122 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGDGVSFLL AKNYWSSGLM QNQRIRIRLK AFDHRLIDQS TAEIVETAKR TGAQVRGPIP  60
   61 LPTRKERFTV LISPHVNKDA RDQYEIRTHK RLVDIVEPTE KTVDALMRLD LAAGVDVQIS 120
  121 LG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 38.39794 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.82905885280588 bayes_pls_golite062009
  • structural molecule activity
    		•  9.25405593567362 bayes_pls_golite062009
  • binding
    		•  0.795193544824207 bayes_pls_golite062009
  • RNA binding
    		•  0.60427462690745 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.513619902565835 bayes_pls_golite062009
  • protein binding
    		•  0.180450584965049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle