YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30255253, gi|...

General Information:
Name(s) found: gi|30261399 [NCBI NR]
gi|30255253 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|30261399|ref|NP_843776.1| transcriptional regulator, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255253|gb|AAP25262.1| transcriptional regulator, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • transcriptional regulator; possible carbohydrate diacid regulator [Bacillus thuringiensis serovar konkukian str. 97-27]gi|49184229|ref|YP_027481.1| transcriptional regulator, putative [Bacillus anthracis str. Sterne]gi|47526575|ref|YP_017924.1| transcri [nrdb_11152004_Chlamydomonas]
  • transcriptional regulator, putative [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 371 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of carbohydrate metabolic process [ISS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFPDLANKI VREVRRLIKE NIIIINIQGV IIASTDIERI GQFHEGALRC AKQKKTVIIT  60
   61 KEDERRLHGV KAGMNLPLLF HDEVIGVIGI TGEPENISQY GEILRKMTEL LIHENYFLEQ 120
  121 LELEHRSYEA FVFDWLQNTD WSPSFLDRAK TLGIDLYKKK QLILFSIDQN DTMLQRKIWQ 180
  181 HVRNLLTKEH LFVRWGNDRF ILFTAMSSKE QTYQFLKRLK QDCETLFSIP LYIGIGQSVT 240
  241 PSNMNLSYEQ ALQALSVSLA TKKIVFNDDL RLEMCLQDIS AETREQFLKR TIKNLLSSPE 300
  301 LMHTLRLFID YNQSYKQTAE QLHIHINTLH YRLKKIEEYT GLDPKQFKDL NILYFSLLLL 360
  361 DNHTKKNDKI D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] FFAS03 1.13 No description for 2gx5A was found.
    2 View Details [137..278] MSA 46.611997 View MSA. No confident structure predictions are available.
    3 View Details [279..371] FFAS03 1.22 DNA-binding domain of NTRC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  3.3433274000438 bayes_pls_golite062009
  • DNA binding
    		•  2.69924718143396 bayes_pls_golite062009
  • binding
    		•  2.59564404935518 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.49248256652331 bayes_pls_golite062009
  • transcription factor activity
    		•  2.13079795809497 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.694747504121538 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.611882179195983 bayes_pls_golite062009
  • protein binding
    		•  0.440093783038461 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.382260654915774 bayes_pls_golite062009
  • transcription activator activity
    		•  0.249743327112707 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle