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Protein Overview: gi|30261625, gi|...

General Information:
Name(s) found: gi|30261625 [NCBI NR]
gi|30255853 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30261625|ref|NP_844002.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255853|gb|AAP25488.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 213 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [ISSLink to PubMed article]
    Molecular Function: uracil DNA N-glycosylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYPDHLVKQ VKERSAPYQL EGFLSGQGPE NPKFMLLGEA PGETEIHNGI PFSGRAGKQL  60
   61 MGFLERIHVT REEVYITSAV RSRPYKWREK KERSGSIIQK KYNRTPNQGE IVAHAPLLDY 120
  121 ELEKLNPKLI VTLGNIGLQR LTGKDKKITD VHGQLLKQPI QKLKDMQSAE FIWSEKEYHI 180
  181 FPTFHPASIF YNRSLLELIY EDLEKLKQYV IKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 52.69897 Crystal Structure Of Uracil-DNA Glycosylase From Thermus Thermophilus HB8

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA N-glycosylase activity
    		•  4.49770781621045 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing N-glycosyl compounds
    		•  4.14479139843076 bayes_pls_golite062009
  • uracil DNA N-glycosylase activity
    		•  3.90350764950421 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  2.96262005834299 bayes_pls_golite062009
  • catalytic activity
    		•  1.96155289609929 bayes_pls_golite062009
  • hydrolase activity
    		•  1.80710505371922 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle