YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24374439, gi|...

General Information:
Name(s) found: gi|24374439 [NCBI NR]
gi|24349015 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|24374439|ref|NP_718482.1| formate acetyltransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349015|gb|AAN55926.1|AE015730_3 formate acetyltransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • formate acetyltransferase [Shewanella oneidensis MR-1]gi|24349015|gb|AAN55926.1| formate acetyltransferase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • formate acetyltransferase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 760 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fermentation [ISSLink to PubMed article]
    Molecular Function: formate C-acetyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDKTELFAN AWEGFTPGDW KSEVNVRDFI QQNYAPYEGD ESFLAGATDA TTQLWDKVME  60
   61 GIKQENRTHA PVDFDTKMVS TITSHDAGYI NKDLETIVGL QTDAPLKRAM LPNGGIRMVE 120
  121 SSCAAYDRVL DEDVKYIYSE LRKTHNQGVF DVYTPEIMAC RKSGVLTGLP DAYGRGRIIG 180
  181 DYRRVALYGI DFLMKDKFAQ FSSLQAQFEA GEDLSNVIQL REEIAEQHRA LGQMKKMAAK 240
  241 YGFDISRPAS NAKEAIQWTY FGYLAAVKSQ NGAAMSLGRT SSFLDIYIER DLKNGVITEQ 300
  301 QAQEMIDHFV MKLRMVRFLR TPEYDELFSG DPIWATESIG GMGLDGRTLV TKSSFRFLNT 360
  361 LYTMGPSPEP NITVLWSEKL PVGFKKYCAK VSIDTSSIQY ENDDLMRPDF QSDDYAIACC 420
  421 VSPMVVGKHM QFFGARANLA KTMLYAINGG VDEKLKIQIA PKADPITDKV LNFDDVMNRL 480
  481 DGLMDWLATQ YVTSLNAIHY MHDKYSYEAA LMALHDRDVR RTMACGIAGL SIAADSLSAI 540
  541 KYAQVKPVRD ENGIAVDFEI SGDYPKFGNN DPRVDDIACD LVERFMAKIR DRKMYRNAIP 600
  601 TQSILTITSN VVYGKKTGNT PDGRRSGAPF APGANPMHGR DEKGAIASLT SVAKLPFAHA 660
  661 QDGISYTFSI VPNALGKDED GRRTNLAALM DGYFAHNEGH EGGQHLNVNV MNREMLEDAV 720
  721 VNPDKYPQLT IRVSGYAVRF NSLTPEQQQD VITRTFTKGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..760] PSI-BLAST 1000.0 Pyruvate formate-lyase, PFL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.95058695475279 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
    		•  1.72563679072631 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups
    		•  1.43559439297918 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.42705638794743 bayes_pls_golite062009
  • ribonucleoside-diphosphate reductase activity
    		•  1.37298861502572 bayes_pls_golite062009
  • C-acyltransferase activity
    		•  0.0923196663496405 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle