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Protein Overview: RRF_SHEON

General Information:
Name(s) found: RRF_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Ribosome-recycling factor OS=Shewanella oneidensis (strain MR-1) GN=frr PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 185 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [ISSLink to PubMed article]
    Molecular Function: translation factor activity, nucleic acid binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIADIKKDAQ ERMGKCVDAT KNQMAKVRTG RAHPSLLDSI QVSYYGTMTP LNQVANVGVE  60
   61 DARTLSVTVF DRSAIQAVEK AIMSSDLGLN PMSAGATLRI PLPALTEERR KDFIKVVRAE 120
  121 AEGGRVAIRN VRRDAISDVK KLEKAKECTE DDVRRFEDEV QKFTDAHIKK VDEILAAKEI 180
  181 ELMEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 68.522879 Ribosome recycling factor, RRF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation regulator activity
    		•  4.3587179630028 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  4.16037247039451 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.79085926340206 bayes_pls_golite062009
  • binding
    		•  2.89152455528061 bayes_pls_golite062009
  • translation termination factor activity
    		•  2.10810503428749 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle