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Protein Overview: gi|24373067, gi|...

General Information:
Name(s) found: gi|24373067 [NCBI NR]
gi|24347246 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373067|ref|NP_717110.1| 4-alpha-glucanotransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347246|gb|AAN54554.1|AE015595_1 4-alpha-glucanotransferase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 769 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycogen catabolic process [ISSLink to PubMed article]
    Molecular Function: 4-alpha-glucanotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLEKLLYLR GVGADFTDCF GQYIRIPEAD RQGILTCMLQ DTNEPHNEAE LSAVNRLTQS  60
   61 AIAAQVYQLD AQHWTQVLPA FHWCYVDEPW VCLYLPQSYR GDLLLTFKCE QGEVIVFNVP 120
  121 FSGLKPIGDY RIEESELARH GDSPFADECQ FIQYRLDLLA HEFDCCDVSE QDKLSDVSCL 180
  181 GLGYHKLSVS LGDTTSTLGD CTSGIHHAEL TARKANEFYG HFMLAPRTAY QGVMNSVAQR 240
  241 KRHKPWGVSV QLYSVRSDNQ WGIGDFGDLE QLITLVAEYG ADFIQLNPLH ALDIAVPEQP 300
  301 SPYSPCDRRR LNPLYIHLSS VPEFELLAEE FAANEWQEAI ALLNTENWLD YPKVSELKYR 360
  361 AFARLYTVFC ESHLQQRTLR AQRFHVFVKQ EGESLREFAQ AEYLRSPSAI AQDESFYLYL 420
  421 QFVAEEQLQL CQLKAKEAGM GIGLIRDLAV GAALQGVEVQ ANSQLFCLNA SIGAPPDPFA 480
  481 PQGQNWGLTP LDPIKLKQDR YRHFIALIRA NMTYCGALRI DHVMGLLRLW WWPLDKRLGQ 540
  541 GAYVYYPVET LLAILCLESQ RARCVVIGED LGLVPPDIIH RLYHAGVYSN ELFYFCKDHQ 600
  601 GFKPPSQYKF QSLMMLANHD VPTLVAWWTG SDLHLRRQLD LLTTDEQLGE ALAGREQEKH 660
  661 QLVHSLISQG LLPETDIQQI DLEDLLTAWM ALGASGNSAL YSVQWCDLLA DRHAVNIPGT 720
  721 WLEYPNWQRR LPITLRDAAT QSTVALRLQR IAAARHLPEI AAQTDNTFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] deduced N/A No confident structure predictions are available.
    2 View Details [243..769] PSI-BLAST 141.0 No description for 2owcA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle