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Protein Overview: gi|24372795, gi|...

General Information:
Name(s) found: gi|24372795 [NCBI NR]
gi|24346883 [NCBI NR]
Description(s) found:
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  • gi|24372795|ref|NP_716837.1| NupC family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346883|gb|AAN54282.1|AE015565_5 NupC family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • NupC family protein [Shewanella oneidensis MR-1]gi|24346883|gb|AAN54282.1| NupC family protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • NupC family protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleoside transport [ISSLink to PubMed article]
    Molecular Function: nucleoside transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILMSLVGV VVLLAIGFLL SNNKKAINLR TVGGALAIQA AFGGFVLYVP VGKDILKGMS  60
   61 DAVSSVIGFA QNGIGFLFGD LANFKLGFIF AVNVLPVIVF FSSLIAVLYY LGVMQWIIRI 120
  121 IGGGLQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIPT MTQSELFAVM VGGLASIAGS 180
  181 VLAGYAQMGV PIEFLVAASF MAAPGGLLMA KLMHPETEVA KNDMDELPED PDKPANVLDA 240
  241 AAAGASSGMH LALNVGAMLL AFVGLIAMIN GIIGGVGGWF GVEGLTLELI LGYVFMPLAF 300
  301 LIGVPWNEAL VAGSFIGQKI IVNEFVAYLN FAPYISEAAT ACTSVAAEVV KGSLPLCVAE 360
  361 TQAVMTSRTQ AIVSFALCGF ANLSSIAILL GGLGAMAPNR RHDLAKMGIR AVIAGSLANL 420
  421 MSATIAGLFL AI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] Pfam 33.79588 No description for PF01773.11 was found. No confident structure predictions are available.
    2 View Details [87..259] Pfam 16.481486 No description for PF07670.5 was found. No confident structure predictions are available.
    3 View Details [260..432] MSA 3.103971 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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