YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: GCST_SHEON

General Information:
Name(s) found: GCST_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • Aminomethyltransferase OS=Shewanella oneidensis (strain MR-1) GN=gcvT PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 364 amino acids

    Gene Ontology:
    Cellular Component: glycine cleavage complex [ISSLink to PubMed article]
    Biological Process: glycine catabolic process [ISSLink to PubMed article]
    Molecular Function: aminomethyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKTVLFNK HLESNAKMVD FHGWDMPLNY GSQIEEHHAV RQDAGMFDVS HMTVVDVTGT  60
   61 DACAFLRKLL ANDVAKLKVP GKALYGGMLD DNAGIIDDLI TYYLTDTFYR VVVNSATREK 120
  121 DLAWIAKQSQ GFDVTVTERP ELAMIAVQGP NAKAKAAAVF SSEQNAAIEG MKPFFGKQAG 180
  181 SLFIATTGYT GEAGYEIIVP ETEAEALWQA LLDQGVKPCG LGARDTLRLE AGMNLYGLDM 240
  241 DETINPLAAN MGWTIAWEPT DRDFIGRKAL EALRDAGTDK LVGLVMEEKG VLRHDMPVFF 300
  301 TDAAGVEQQG VITSGTFSPT LGYSIAMARV PSSIGDTAEV EMRKKRVAVR VVAPNFVRNG 360
  361 KQAF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..364] PSI-BLAST 120.0 Crystal structure of aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system (np417381) from Escherichia coli k12 at 1.70 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminomethyltransferase activity
    		•  10.5654741349554 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  5.37200252580633 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  5.37200252580633 bayes_pls_golite062009
  • methyltransferase activity
    		•  3.28983380541263 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  3.20782575104451 bayes_pls_golite062009
  • catalytic activity
    		•  1.65079399897053 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.19783690850993 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.867567984371732 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.550291785460228 bayes_pls_golite062009
  • transferase activity
    		•  0.217873555384951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle