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Protein Overview: UTP22_YEAST

General Information:
Name(s) found: UTP22_YEAST [Swiss-Prot]
Description(s) found:
  • U3 small nucleolar RNA-associated protein 22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP22 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1237 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSVKRKAS ETSDQNIVKV QKKHSTQDST TDNGSKENDH SSQAINERTV PEQENDESDT  60
   61 SPESNEVATN TAATRHNGKV TATESYDIHI ARETAELFKS NIFKLQIDEL LEQVKLKQKH 120
  121 VLKVEKFLHK LYDILQEIPD WEEKSLAEVD SFFKNKIVSV PFVDPKPIPQ NTNYKFNYKK 180
  181 PDISLIGSFA LKAGIYQPNG SSIDTLLTMP KELFEKKDFL NFRCLHKRSV YLAYLTHHLL 240
  241 ILLKKDKLDS FLQLEYSYFD NDPLLPILRI SCSKPTGDSL SDYNFYKTRF SINLLIGFPY 300
  301 KVFEPKKLLP NRNCIRIAQE SKEQSLPATP LYNFSVLSSS THENYLKYLY KTKKQTESFV 360
  361 EATVLGRLWL QQRGFSSNMS HSGSLGGFGT FEFTILMAAL LNGGGINSNK ILLHGFSSYQ 420
  421 LFKGVIKYLA TMDLCHDGHL QFHSNPENSS SSPASKYIDE GFQTPTLFDK STKVNILTKM 480
  481 TVSSYQILKE YAGETLRMLN NVVQDQFSNI FLTNISRFDN LKYDLCYDVQ LPLGKYNNLE 540
  541 TSLAATFGSM ERVKFITLEN FLAHKITNVA RYALGDRIKY IQIEMVGQKS DFPITKRKVY 600
  601 SNTGGNHFNF DFVRVKLIVN PSECDKLVTK GPAHSETMST EAAVFKNFWG IKSSLRRFKD 660
  661 GSITHCCVWS TSSSEPIISS IVNFALQKHV SKKAQISNET IKKFHNFLPL PNLPSSAKTS 720
  721 VLNLSSFFNL KKSFDDLYKI IFQMKLPLSV KSILPVGSAF RYTSLCQPVP FAYSDPDFFQ 780
  781 DVILEFETSP KWPDEITSLE KAKTAFLLKI QEELSANSST YRSFFSRDES IPYNLEIVTL 840
  841 NILTPEGYGF KFRVLTERDE ILYLRAIANA RNELKPELEA TFLKFTAKYL ASVRHTRTLE 900
  901 NISHSYQFYS PVVRLFKRWL DTHLLLGHIT DELAELIAIK PFVDPAPYFI PGSLENGFLK 960
  961 VLKFISQWNW KDDPLILDLV KPEDDIRDTF ETSIGAGSEL DSKTMKKLSE RLTLAQYKGI1020
 1021 QMNFTNLRNS DPNGTHLQFF VASKNDPSGI LYSSGIPLPI ATRLTALAKV AVNLLQTHGL1080
 1081 NQQTINLLFT PGLKDYDFVV DLRTPIGLKS SCGILSATEF KNITNDQAPS NFPENLNDLS1140
 1141 EKMDPTYQLV KYLNLKYKNS LILSSRKYIG VNGGEKGDKN VITGLIKPLF KGAHKFRVNL1200
 1201 DCNVKPVDDE NVILNKEAIF HEIAAFGNDM VINFETD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] deduced N/A No confident structure predictions are available.
    2 View Details [165..1237] Pfam 1000.0 Nrap protein No confident structure predictions are available.
    3 View Details [906..1033] MSA 1.050982 View MSA. No confident structure predictions are available.
    4 View Details [1034..1237] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA binding
    		•  3.21555027517466 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.7166207083291 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.4031460115872 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  0.986864608285919 bayes_pls_golite062009
  • binding
    		•  0.940725834840942 bayes_pls_golite062009
  • DNA binding
    		•  0.931982952649779 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.825883515331479 bayes_pls_golite062009
  • catalytic activity
    		•  0.718799603354138 bayes_pls_golite062009
  • transferase activity
    		•  0.245732860673913 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle