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Protein Overview: ECM29_YEAST

General Information:
Name(s) found: ECM29_YEAST [Swiss-Prot]
Description(s) found:
  • Proteasome component ECM29 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM29 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1868 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISSDEAKE KQLVEKAELR LAIADSPQKF ETNLQTFLPP LLLKLASPHA SVRTAVFSAL  60
   61 KNLISRINTL PQVQLPVRAL IVQAKEPNLA AQQDSTNVRL YSLLLASKGI DRLSLQDRQQ 120
  121 LLPLVVSNIS CLTGTVAARM FHILLKLILE WVAPQESSHE QEEFVQFLQL DNDGFSFLMR 180
  181 QFTRFFLLVP SKQVQVSQQP LSRGYTCPGL SLTDVAFFTY DAGVTFNKEQ LNKFKKAIFQ 240
  241 FVCRGMAATQ TIEQSPRMIE LMEFLCVVST DSTNLSDDAA QFMKRFPMPY ENEEFITFLQ 300
  301 TLYIGNTANG RPPVKAILQE KILSILNRSH FATTKAECIS LICSIGLHSS EYKLRSLTLS 360
  361 FIRHVAKLNY KNLNPASSSP SSTDFSTCIV SLIRNNLHAE GWPKLQLGPQ TPAFNTAILQ 420
  421 RQLQYETLGD ILKRDFELVS DLSYIEFLFE SLKNDLPQFR SSIQESLLSL VGHLSILPQQ 480
  481 SKLKLKNLLR KNLSIDEQQR EDNNDAVNSI MALKFVSIKF TNAAFPFHDP EARLFNIWGT 540
  541 VRTNRFDIIE ESFKGLQPFW FRVNNASINT SATVKTSDLL GSHLSETEFP PFREFLQVLI 600
  601 DQLDSEAASI TRKSLNNAVR FSKQCLISNA IYGKKTMVIQ DEDWSVRIDK ALELDDTVVS 660
  661 RVNEMVQGMN DDIFIRYLTL LSNEFTATNS KGEQIAIFPY QDPIFGSVLL TLLNFVSNNV 720
  721 LRRLEILVPD LYHLVIMKFQ SLSDNDLAVC ATIIGIISTA IADSTHVKRI TKIAQSQTMA 780
  781 ETYVASYVVP RLYLKDQTNH IESDSILNLL NILTTHLSHP GTNKDMILKL VCQVTKFGLL 840
  841 LQVSAQERKD FLKKVMDTIQ DKLINDVTAI QTWSYLSLYS TDLENSSLFQ EKLLETNVSK 900
  901 QNDFLFSVGE SLSVVAGKWS SKYLIKQIDI PNFNVEIMQQ KFPATNVTTI LDEIFSGCDS 960
  961 TKPSLRKASC IWLLSYIQYL GHLPEVSSKC NDIHLRFMRF LADRDEFIQD SAARGLSLVY1020
 1021 EIGGSDLKES MVKGLLKSFT ESTAGSASTS ATGISGSVSE ETELFEPGVL NTGDGSISTY1080
 1081 KDILNLASEV GDPALVYKFM SLAKSSALWS SRKGIAFGLG AIMSKSSLEE LLLKDQQTAK1140
 1141 KLIPKLYRYR FDPFQAVSRS MTDIWNTLIP ESSLTISLYF NDILDELLCG MANKEWRVRE1200
 1201 ASTSALLQLI QSQPQEKFSE KMLKIWTMAF RTMDDIKDSV REVGTKFTTV LAKILARSID1260
 1261 VEKGVNPTKS KEILDNILPF LWGPHGLNSD AEEVRNFALT TLIDLVKHSP GAIKPFTPKL1320
 1321 IYDFITLFSS IEPQVINYLA LNAANYNIDA NVIDTQRKNG VTNSPLFQTI EKLINNSDDC1380
 1381 MMEEIINVVI KASRKSVGLP SKVASSLVII ILVKRYSIEM KPYSGKLLKV CLTMFEDRNE1440
 1441 SVNIAFAISM GYLFKVSALD KCIKYSEKLI TKYFEPTSTE NNKKVVGTAI DSILNYAKSE1500
 1501 FDNVASVFMP LIFIACNDED KDLETLYNKI WTEASSSGAG TVKLYLPEIL NVLCVNIKSN1560
 1561 DFSIRKTCAK SVIQLCGGIN DSIPYPQIVK LFDISREALS GRSWDGKEHI VAALVSLTEK1620
 1621 FSQTVADNND LQESINHVMY TEVSRKSMKY VKKILPLYAR YINVNPQEET ITFLIEKAKE1680
 1681 MIRLLGSESD DSEGSIKQTS DESTIKRIKP NTEITQKSSK ENIENEEYVI NLLKVSVDIC1740
 1741 NNSKSRYPMN LLEFIIDEIA YLFHNDRIIH TWRTQLAASE IGISIVGRFS TISSADFIQN1800
 1801 VGRLWDQTFP INCNKETIEN VKLQMIKFGG LIIQKIPSLQ NNIEENLRLL NSIDSTSRIE1860
 1861 LELKNIGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] MSA 1.005972 View MSA. No confident structure predictions are available.
    2 View Details [152..525] deduced N/A No confident structure predictions are available.
    3 View Details [526..878] MSA 3.083968 View MSA. No confident structure predictions are available.
    4 View Details [879..1022] PSI-BLAST 46.0 Importin beta
    5 View Details [1023..1153] deduced N/A No confident structure predictions are available.
    6 View Details [1154..1629] MSA 19.377997 View MSA. No confident structure predictions are available.
    7 View Details [1630..1868] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.62777210765927 bayes_pls_golite062009
  • binding
    		•  2.26699794423696 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.954891553462304 bayes_pls_golite062009
  • protein binding
    		•  0.867374463164997 bayes_pls_golite062009
  • DNA binding
    		•  0.0652553830451623 bayes_pls_golite062009
    2
    Term Confidence Notes
  • hydrolase activity
    		•  2.5894939457048 bayes_pls_golite062009
  • binding
    		•  2.37294644142029 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.00618489031368 bayes_pls_golite062009
  • protein binding
    		•  0.992946510849437 bayes_pls_golite062009
  • DNA binding
    		•  0.0559585284546991 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle