YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CCDS12588.1_1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..145] PSI-BLAST 56.0 No description for 2v7fA was found.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • structural constituent of ribosome
  • 5.29433336630028 bayes_pls_golite062009
  • structural molecule activity
  • 5.07265721693681 bayes_pls_golite062009
  • transcription regulator activity
  • 4.44907471960058 bayes_pls_golite062009
  • nucleic acid binding
  • 3.97631536825798 bayes_pls_golite062009
  • DNA binding
  • 3.93431504495991 bayes_pls_golite062009
  • binding
  • 3.52874320222492 bayes_pls_golite062009
  • transcription factor activity
  • 3.48782936574155 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.44917636781125 bayes_pls_golite062009
  • transcription activator activity
  • 2.35901958718112 bayes_pls_golite062009
  • RNA binding
  • 1.88227222208129 bayes_pls_golite062009
  • protein binding
  • 1.80415286835431 bayes_pls_golite062009
  • transcription repressor activity
  • 1.54960543048317 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.2152419300113 bayes_pls_golite062009
  • transcription factor binding
  • 0.13558561552621 bayes_pls_golite062009
  • ligase activity
  • 0.104213649382856 bayes_pls_golite062009
  • mRNA binding
  • 0.036043970189533 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle