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Protein Overview: gi|7494203

General Information:
Name(s) found: gi|7494203 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||T18435 hypothetical protein C0390w - malaria parasite (Plasmodium falciparum) [NCBI NR]
    • Organism: Plasmodium falciparum
    Length: 955 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTGGQGKLN QKNQKGDKKN LSYDNKINNN INISVVEKSE GNYKESYVFY KKDMCDENNN  60
   61 ISNMEGIDQF HNCNNEQKKI DTTTITTYNN NINSSSNNNY NNDYDIDENN NFHCHDDDHK 120
  121 HLDNYCVKDD YSHEDNDQCH VCNTVDMLNL EEERHFCNVC FSFLYYKKYC FYELLRIYKN 180
  181 YSCLNEEEKN LLTESIYAKL YKMYLTTLNN YYFILNILLP QISTHIIIHL LTFTFHKPEE 240
  241 DEHMKEEYVM NEIINKLTNQ ELNNIDKVYN YHNFNVRLLC KDDALIILNE IRSKMINSQN 300
  301 EKKIVDMLNM KCGDVIVDDK NGSDKDSGNN DIHNKDIHNK YDDNMDSSDK SSCNKNSCDN 360
  361 HCDNHCDNHS DNHCDNHSDN HCDNHCDNHC DNHCDNHCDN HCDNHCDNHC DNHCDNHCDN 420
  421 HCDNHCDNHC DNHCDNHCDN HCDNHSDNHC DNHCDNHCDN HCDNHCDNHC DNHCDNHSDN 480
  481 HCDNHCDNHS DNHCDNHCDN HSDNHCDNHC DNHCDNHCDN HCDNHCDNHC DNHCDNHCDN 540
  541 HCDNHCDNHC DNHCDNHCDN HCDNHCDNHC DNNKMNRTHL MNSNTKGDDQ TCKNTNEYSD 600
  601 TSSNHYCNNI EEDTYNVVNP GVDLDVHNII DSKNIKDYHN DIKENMCNNN KTLHADENMP 660
  661 NDNICARENN SKYEHTPPGM RISQAYTPTL DDYNLIQNMS KVRSTLRQFV RDWSMEGQEE 720
  721 RDKAYIPLIN SLDKYLPIHD NYIPKILCPG SGLGRLPYEI AKKGYRSQGN EFSYFMLLGS 780
  781 NFILNYYNEK YSLSIHPYCL CTSNRRGRDD HLKIIQLPDV NTYNKIVLNT DFSMCAGELI 840
  841 EVYYYDKEYF DGVLTCFFLD TAKNLFMYIR TFASILKPNS LWSNIGPLLY HYAEMPNEMS 900
  901 IELAWDEIQI IISKWFTIKE IKWIDNYYTT NFDSMMQVQY HCVFFSAIRN DIPVD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] deduced N/A No confident structure predictions are available.
    2 View Details [125..258] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [259..354] PSI-BLAST 4.69897 Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
    4 View Details [355..696] PSI-BLAST 32.522879 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
    5 View Details [697..955] FFAS03 1.89 Crystal structure of thiopurine S-methyltransferase.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009
    5
    Term Confidence Notes
  • catalytic activity
    		•  0.639646908254091 bayes_pls_golite062009
  • transferase activity
    		•  0.394707018913607 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.0810339077201343 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0737551340470768 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle