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Protein Overview: MTND4_ARATH

General Information:
Name(s) found: MTND4_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Arabidopsis thaliana GN=ARD4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: L-methionine salvage from methylthioadenosine [IEA]
    Molecular Function: metal ion binding [ISS]
    acireductone dioxygenase [iron(II)-requiring] activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALEAWFMDD SNEDQRLPHH RNPKELVSLD YLAELGVLYW KLNPENYEND SELSKIREDR  60
   61 GYDYMDLLDL CPEKVSNYEE KLKNFFTEHI HKDEEIRYCL AGSGYFDVRD KDDRWIRIWM 120
  121 QPGDLIVLPA GIYHRFTLDA SNYIKLMRLF VGEPVWTPYN RPQEEHPVRK KYIHGLTYKF 180
  181 GETVKAH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 70.522879 Crystal structure of Acireductone dioxygenase (13543033) from Mus musculus at 2.06 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.10919583483877 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.264825441145192 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.171717367198296 bayes_pls_golite062009
  • protein binding
    		•  0.133891883527478 bayes_pls_golite062009
  • DNA binding
    		•  0.0452305541151481 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle