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Protein Overview: RH11_ARATH

General Information:
Name(s) found: RH11_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana GN=RH11 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IDA]
    nucleolus [IDA]
    plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASWADVAD SEKAVSQSKP PYVPPHLRNR PSEPVAAPLP QNDHAGYGGQ PAGSRWAPPS  60
   61 SGGGGASGGG YRNDGGRTGY GYGAGGGGGG GGGWNNRSGG WDRREREVNP FGDDAELEPV 120
  121 FTEQENTGIN FDAYEDIPVE TSGGDVPPPV NTFADIDLGD ALNLNIRRCK YVRPTPVQRH 180
  181 AIPILLAERD LMACAQTGSG KTAAFCFPII SGIMKDQHVE RPRGSRAVYP FAVILSPTRE 240
  241 LACQIHDEAK KFSYQTGVKV VVAYGGTPIH QQLRELERGC DILVATPGRL NDLLERARVS 300
  301 MQMIRFLALD EADRMLDMGF EPQIRKIVEQ MDMPPRGVRQ TMLFSATFPS QIQRLAADFM 360
  361 SNYIFLAVGR VGSSTDLITQ RVEFVQESDK RSHLMDLLHA QRETQDKQSL TLVFVETKRG 420
  421 ADTLENWLCM NEFPATSIHG DRTQQEREVA LRSFKTGRTP ILVATDVAAR GLDIPHVAHV 480
  481 VNFDLPNDID DYVHRIGRTG RAGKSGIATA FFNENNAQLA RSLAELMQEA NQEVPEWLTR 540
  541 YASRASFGGG KKRSGGRFGG RDFRREGSYS RGGGGGGGGG GSDYYGGGGY GGGGYGGAPS 600
  601 GGYGAGVTSA WD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] MSA 1.342996 View MSA. No confident structure predictions are available.
    2 View Details [95..551] PSI-BLAST 102.0 No description for 2i4iA was found.
    3 View Details [552..612] PSI-BLAST 21.522879 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle