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Protein Overview: ARGE_ARATH

General Information:
Name(s) found: ARGE_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Acetylornithine deacetylase OS=Arabidopsis thaliana GN=At4g17830 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: protein dimerization activity [IEA]
    metallopeptidase activity [IEA][ISS]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSKALIE SIGSLDKDSY VSLLSKLIGE SKFVQNNPPE LIPQEDLIVK HVLDSLRPYS  60
   61 TETGGGPLVI NHVAYHSGRG NLIVEYPGSV PGKILSFVGM HMDVVTANPD DWEFDPFSLS 120
  121 IDGDKLRGRG TTDCLGHVAL VTELMKKLGQ AKPALKSTVV AVFIASEENS SIPGVGVDML 180
  181 VKDKLLDKLK SGPLYWIDTA DKQPCVGTGG MIPWKLQFTG KLFHSGLAHK AINAMELAME 240
  241 GLKEIQARFY RDFPPHPQEE VYGFATPSTM KPTQWCYPAG GINQIPGECT VSGDVRLTPF 300
  301 YDVKEVITKL QEYVDDINGN IERLETRGPV SKYVLPDENL RGRLTLSFDE ASAGVACNLD 360
  361 SPGFHVLCKA TEEVVGHVKP YSITGTLPLI RDLQDEGFDV QTSGYGLMAT YHAKNEYCLL 420
  421 TDMCQGFDVF IRIISQLEQV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 74.045757 Crystal structure of succinyl diaminopimelate desuccinylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.15484303724533 bayes_pls_golite062009
  • catalytic activity
    		•  1.10014888397123 bayes_pls_golite062009
  • binding
    		•  0.00689905780826694 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle