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Protein Overview: gi|229842906, gi...

General Information:
Name(s) found: gi|229842906 [NCBI NR]
gi|229690173 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|229842906|ref|ZP_04463058.1| ADP-heptose synthase /D-glycero-beta-D-manno-heptose 7-phosphate kinase [Yersinia pestis biovar Orientalis str. India 195] [NCBI NR]
  • gi|229690173|gb|EEO82230.1| ADP-heptose synthase /D-glycero-beta-D-manno-heptose 7-phosphate kinase [Yersinia pestis biovar Orientalis str. India 195] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. India 195
    Length: 476 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVTLPDFRR AGVLVVGDVM LDRYWYGPTC RISPEAPVPV VKVDTIEERP GGAANVAMNI  60
   61 ASLGAVARLV GLTGIDDAAR ALICKLSEVR VRCDFVSVPT HPTITKLRVL SRNQQLIRLD 120
  121 FEEGFDGVDP TPIFERIQLA LPQIGALVLS DYAKGALNSV QPMIQLARKA NVPVLIDPKG 180
  181 SDFERYRGAT LLTPNLSEFE AVVGRCKNEE ELVNRGMQLV ADFELSALLV TRSEQGMTLL 240
  241 QLGKPPLHLP TQAKEVFDVT GAGDTVIGVL AAALAAGNSL EESCFLANAA AGVVVGKLGT 300
  301 STVSPIELEN AIRGRAETGF GVMDEQQLKI AVAQARQRGE KVVMTNGIFD ILHAGHVSYL 360
  361 ANARKLGDRL IVAVNSDAST KRLKGEKRPV NPLEQRMVVL GALEAVDWVV PFEEDTPQRL 420
  421 IADILPDLLV KGGDYKPHEI AGSEEVWAAG GEVKVLNFED GVSTTNIIQS IKNGRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..317] PSI-BLAST 48.154902 Ribokinase
    2 View Details [318..476] PSI-BLAST 28.69897 CTP:glycerol-3-phosphate cytidylyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribokinase activity
    		•  4.25786236481087 bayes_pls_golite062009
  • catalytic activity
    		•  2.11518580948187 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  1.99025603598964 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.69918601153494 bayes_pls_golite062009
  • transferase activity
    		•  1.65599843675995 bayes_pls_golite062009
  • kinase activity
    		•  1.6060752218324 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.143446029424335 bayes_pls_golite062009
  • phosphofructokinase activity
    		•  0.0784945911925501 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  2.74718220535323 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  2.59548305938725 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  2.59548305938725 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  2.58249040683736 bayes_pls_golite062009
  • ligase activity
    		•  2.24624957842862 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.12185374712018 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle