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Protein Overview: ACCH4_ARATH

General Information:
Name(s) found: ACCH4_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T00917 hypothetical protein F21B7.31 - Arabidopsis thaliana [NCBI NR]
  • gi|22137088|gb|AAM91389.1| At1g03400/F21B7_31 [Arabidopsis thaliana] [NCBI NR]
  • gi|15218794|ref|NP_171839.1| 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15146296|gb|AAK83631.1| At1g03400/F21B7_31 [Arabidopsis thaliana] [NCBI NR]
  • 1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g03400 PE=2 SV=1 [Swiss-Prot]
  • At1g03400/F21B7_31 [Arabidopsis thaliana]gi|15146296|gb|AAK83631.1| At1g03400/F21B7_31 [Arabidopsis thaliana]gi|15218794|ref|NP_171839.1| 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana]gi|7433201|pir||T00917 hypothetical protein F [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 2-oxoglutarate-dependent dioxygenase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:842894-844157 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g03400/F21B7_31 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:842895-844158 REVERSE LENGTH=351 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTDRSSQA KAFDEAKIGV KGLVDSGITE IPALFRATPA TLASLKSPPP PKHLTIPTVD  60
   61 LKGASVVEKI GEAAEKWGLF HLVNHGIPVE VLERMIQGIR GFHEQEPEAK KRFYSRDHTR 120
  121 DVLYFSNHDL QNSEAASWRD TLGCYTAPEP PRLEDLPAVC GEIMLEYSKE IMSLGERLFE 180
  181 LLSEALGLNS HHLKDMDCAK SQYMVGQHYP PCPQPDLTIG INKHTDISFL TVLLQDNVGG 240
  241 LQVFHEQYWI DVTPVPGALV INIGDFLQLI TNDKFISAEH RVIANGSSEP RTSVAIVFST 300
  301 FMRAYSRVYG PIKDLLSAEN PAKYRDCTLT EFSTIFSSKT LDAPKLHHFK I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] PSI-BLAST 85.69897 No description for 2brtA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 1-aminocyclopropane-1-carboxylate oxidase activity
    		•  2.55319769490634 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  1.82471557626796 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
    		•  1.45256699472411 bayes_pls_golite062009
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • binding
    		•  0.881222146308311 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.748070809709687 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle