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Protein Overview: gi|190406908

General Information:
Name(s) found: gi|190406908 [NCBI NR]
Description(s) found:
  • gi|190406908|gb|EDV10175.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 860 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTALDDLHG DLVTLEDNEI INNSDHSSSH STSHEEEDEE EDDTEDIELI EKDGNKILSS  60
   61 RIHPEDEIIN DGLNIWIPVQ MLKKNIAKFW SHFLAIEKKL TKVKCKHCGE ILTRSDASLT 120
  121 KTFRSHLKTK HNISANKNFY SMNFTVGDSN LKNNTSSTEI TRRHGYDSLT FNSDQSFKCF 180
  181 DIGKLQSSNY LSISQLVAIV IASENLPLNF FENVSFKSLL SKFHRIPPLT TNIIEESIIG 240
  241 LSKSIDELIR RSISRNDTQL PFTIHLSDSK ESNQPLYLKY SREIRAQLSN LDLSHLISVN 300
  301 FTELAGKRSL FSLQLFDNTN KVSKGLPLSI FVRKTTDIDI SVWQEQLNNL YSKYPGLQKS 360
  361 VISITLPQSH YTMVLENRNS HNFTFHSGSV REIKYHTCIV SELLHCFLQP LFNVPTESML 420
  421 SSFSVAKENH SGGSLLDSLI DFSHIDLSST ILGKICCLIE EVNLNDSLKS DFLLYCQNYT 480
  481 QPNCNELTSI LSCNCDRFSA LKSILEKFAN LVPFFKSINS HLENESLSES DFRLINTVEE 540
  541 TLRTFEQSIE YFASSAPLKF THTLVFIIKF ELYLTEIIRS FKFTKSKKPF EKILARLLKV 600
  601 KDLYLLDDVN LIGAFLYPSI FQSKSLLNEI FGTTSVNKIV HNMTKIVLRY LKNFINITNF 660
  661 RSSNSGGESG RNSGNNLLSD YEAIFMKESR DVELLCNTKL TAPLTEDSLL VQIIRDDLLR 720
  721 YVNRIAHELP NAYHDYLNDN DISFDGSHFT KHELSEENDS NSGEWCLNPM EETFDIHIPI 780
  781 SDSIWNNYIS SKNKIEVIDI LLQLLSVNST SSIRSELSSL TANQDFSTKL SEETIKIKLL 840
  841 NSQFNLEKIN FHSGSIFDAC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] deduced N/A No confident structure predictions are available.
    2 View Details [73..152] Pfam 13.508638 BED zinc finger No confident structure predictions are available.
    3 View Details [153..455] ORFEUS 7.13 CBP80, 80KDa nuclear cap-binding protein
    4 View Details [456..656] ORFEUS 7.13 CBP80, 80KDa nuclear cap-binding protein
    5 View Details [657..736] ORFEUS 7.28 Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
    6 View Details [737..860] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nuclease activity
    		•  0.684822695593649 bayes_pls_golite062009
  • catalytic activity
    		•  0.402379787166751 bayes_pls_golite062009
  • hydrolase activity
    		•  0.253454833507999 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.223965050767284 bayes_pls_golite062009
  • binding
    		•  0.0417104526044634 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle