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Protein Overview: gi|42570548

General Information:
Name(s) found: gi|42570548 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|42570548|ref|NP_850897.2| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTDDFVAD TTPELMFPFY HHPLSAYDYS SSYILQEKAY CCFMCVYSLF DKEPMLLPDI  60
   61 DYHCTECGLN MHKKCIKRLF LNWPFLCNHV LNIFQNTFTS SDNIDDFSCH FCQSRIKSSF 120
  121 ARFTLCNINV DEKCMVELQP PLKISEPKHH KYSLTILLWL VTFICSPCGV EGDHNPYVCL 180
  181 ECSLMVHRDC IEDLPRVISI NRHDHRISHT FHLGEREGGW ECGVCQTMIN WVYGAYKCSR 240
  241 CPSYVVHSGC ATKKEVWDGL DLEDVPDEEE EIKDPFKVIN ENGDIVHISH EEHVLRLDEN 300
  301 YVTDDANMRC QCCILAINGD PCYRCVECDF ILHDACANLP RKKQHLLHKH KLTLSSTCID 360
  361 GETYCQCKVY DVYTDGFIYK CHHEDCESKY INYDARCSSV LEPFHHDLHQ HPLYFTLQSS 420
  421 RRCQACDREI HDDPLNCTVC DDYSLFMRCA TLPRKVKHRC DDHFLSLCQG VGNAIGDLWC 480
  481 DICETKTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] FFAS03 1.15 Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
    2 View Details [85..147] PSI-BLAST 5.522879 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    3 View Details [148..270] FFAS03 2.19 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    4 View Details [271..488] MSA 16.12099 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle