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Protein Overview: CDC26_ARATH

General Information:
Name(s) found: CDC26_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|18421178|ref|NP_568505.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • Cell division cycle 20.6, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-6 PE=3 SV=1 [Swiss-Prot]
  • transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transducin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:9976011-9977605 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:9976007-9977601 FORWARD LENGTH=428 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Cell division cycle 20, cofactor of APC complex OS=Arabidopsis thaliana GN=At5g27945 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: heterotrimeric G-protein complex [ISS]
    anaphase-promoting complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKSIALALC LTHHSPMVLS IVDYGDSQEK TIDSLWKKPH GSDLTWSGFS RVGVTEAYFA  60
   61 VPVDHFLTNP PSLRLSQTIY CRRGSSYVET EKVEEEDRDD FLKQVWFLTD NLVFFFVDIE 120
  121 EYIVIEQLGD TVYLWDASSC YTSKLVTIDD ENGPVTSINW TQDGLDLAVG LDNSEVQVWD 180
  181 CVSNRHVRTL RGGHESRVGS LAWNNHILTT GGMDGKIVNN DVRIRSSIIG TYVGHTEEVC 240
  241 GLKWSESGKK LASGGNDNVV HIWDRSLASS NPTRQWLHRF EEHTAAVRAL AWCPFQASLL 300
  301 ATGGGVGDGK INFWNTHTGA CLNSVETGSQ VCSLLWSKSE RELLSAHGFT QNQLTLWKYP 360
  361 SMVKMAELNG HTSRVLFMAQ SPDGCTVASA AGDETLRLWN VFGEPPKTTK KAASKKYTEP 420
  421 FAHVNHIR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] PSI-BLAST 33.09691 No description for 2hesX was found.
    2 View Details [88..428] PSI-BLAST 68.154902 PAF-AH Holoenzyme: Lis1/Alfa2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.145838346152539 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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