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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HEXO2_ARATH
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE  60
   61 HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV VTVTDFSLPL HHGVDESYKL 120
  121 SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT 180
  181 SRNYYGVDDI MRTIKAMSAN KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE 240
  241 DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG 300
  301 TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS 360
  361 QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL PKEHTILQTW NNGPENTKRI 420
  421 VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL 480
  481 LNEEERKLVL GGEVALWSEQ ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR 540
  541 LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle