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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC550.15c
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSFACTTC TVAFNNAESQ KIHWKSDWHH YNLKRKVASL PPLSAEVFAG KILSIQKQNE  60
   61 EVQKKAEFYQ NCEVCNKKFY SEGAYSSHMA SKKHRDNLSK FQRNSRIKKL QSEDASSIAS 120
  121 STLSMGEPVV DSEIEEEEDL ASQLTSRAIS LSNLSLHGRE SEPSKTELAT SIPQSNEASK 180
  181 SHLFTQEPTP EEIEAELARR SSQRLSPRDC LFCAASFSSF DTCKKHMKAS HSLYIPEREY 240
  241 LVDEPSLFDY LAEKISIGFT CLTCNREFKS LEAVRAHMQQ KGHTSIAYDT EDEQLELSDF 300
  301 YDFTTSYPDY AVKQDETVVE EDGSSGEGDW EDVSDDSDNS SLDSLEMGRV PIADEYELHL 360
  361 PSGNRVGHRS LSRYFRQNLH SSSTAVGDGA SIHQNVARRA MSGNARAYRQ AVETSIAGVR 420
  421 DGRKNYSASH IKSFQDQRRR EEFANKMGIK NNTKKHFRDA LLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle