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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG42251-PD
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSFLFRPF FISVLPAIRT KQLPFGEAQQ ALQLQPAAAA ATAAATTSAA AAANATAAAP  60
   61 QLPPPLPVPV ATLPNQAATA AAAATAAILA THQQQQQQQH QHLSNNNNNG GSTHGQQHTH 120
  121 SNNNNTLPVG AQQQQQQQHQ QQRATLQHPP LPNSNIKQAS VKLIEGYSDP KDTRNHKKVY 180
  181 HKKAKKRSTT GHKRHQQQQQ QQQPHQQQLQ QQQQQTLPTP RSAQQQQQLQ QKLQQRHSTY 240
  241 NNNNGNSRKD KRNSQYNSDS SAPKSSDDEA DIDEEVEQQP LPVPQAPVQS ASQPAAGLNS 300
  301 PDSISDDLVR PLPPQLQRSP RKLTVAPAEH NKRQPSPYYY SDLLKSRDKD KDKDKDKDKD 360
  361 KDKDKDKDKD KDKERDKDRE DFKLKCRQST ASEPPQQTQT QLGGYRKSSS LDVPPAEEQP 420
  421 EAESHEEEDP RTGQDSQSTP KRYSFTEEGV HIIRCETPST STSEESDCSE CLKRREWHAR 480
  481 ALALVRKTCN VQPRNQNPTG SELQLQLQHC DAGEGELLKC CPPPPAPAEN QSQVQPMPPH 540
  541 RLLGPAAVCG ACITSAPASS LAGGRGSELG DDLEEEYFRP RSIFYVHPHG VHECIECAQP 600
  601 AQPATVPAPT LSNPSLDIYG DDEDEVDGDE DEDEEDDSED IMGSRRRQIY ETAFDCKIAK 660
  661 SDDDLDEVDR ITNCSVLLQL SNGNGGDISK VTGSSKTRAE CKRAKNSKNQ ALQEQTGEAH 720
  721 VQVHHVEAEL GKLQLSQVDQ QNQNQNQSQN QQHGVSATGS GASASSTQQL PVRGYTPSPP 780
  781 STAPLPMKFP GKHDRYLNMN SIRSAPNLPA ANPAHPRLRD LRLPIQSMRH QCGGSSNDNS 840
  841 LTDSAYVNPP STNSNSNAAS ASASASVSAT GSAAPRRPRS FVLESGRVLE LRRSAQGHQG 900
  901 GQSTHHHHHH HHHAPGSRRN RHGQSQGQTT GGGHNYSSTE SIATSSSGGS MESLRSSTSE 960
  961 GNRSTSSSES RHSSSLSSHS SESGSGGSGG SGGSSVAYPL RPAPLLLHSK LHILSPISDK1020
 1021 SSQEPASASA SEQSQQPSQQ LAPMASQEDD STTSGAPAGN QVQVNASLKQ PRSNRGAPNK1080
 1081 ALLQLADELL GSDSGISLHS REDGKPQALA LQRLTLPKLQ LIGAEGTTTS ATASGAGGSS1140
 1141 ATGGSSGAGG SGSGSVVASG STGIQQDLRD LPFDMPKLRR RKTLQQEAAC TSGSATSVDL1200
 1201 GELPFDMPKL RRRLRANQAE INNLLMHSTE SSGISQASSS HSMRDDQKMS SKLDTALFRQ1260
 1261 NLTLNLNESR QATKQFGSLD LRGLNSNKEL NMNLSQGYVT AVDLIDVTIP LERQGWYHGA1320
 1321 ITRIEAETTL RPLSEGSFLV RNCESTKQDY SLSLKGAKGF MHMRIQRNET GQYILGQFSR1380
 1381 PFETVPEMIR HFCLNRLPVR GAEHMCLIEP VIAQLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle