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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ir84a-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTYKNARGP AQSKHKSPKN ESVLKWPYKM IKLQVKVISW PLIILTAFLR VLQIESINTN  60
   61 FLELAAFEDF LRSEHLSHVL VVRGDDADGD WKIECHQKLL ANYRVQFYRP EMSANFEDLM 120
  121 FYGSPRTAVL VLNSEHVLVR RQVFGVASEA GYFNNSLAWF ILGSGRESLP VEQLIDQLLS 180
  181 GYRMGIDADI TVALRGPDNA SMLFYDVYRI SRQANTPLII EKKGLWTHSG GYQKFGNFKN 240
  241 TWVIRRRNFL NVTLIGSTVV GCLPNTSPRS LTTYLQIPQL TEKPPGFGDM EYLADDKQLQ 300
  301 QLDPMQRKTY QLFQLVERMF NLSLAISLTD KWGELLDNGS WSGVMGQVTS READFAVCPI 360
  361 RFVLDRQPYV QYSAVLHTQN IHFLFRHPRR SHIKNIFFEP LSNQVWWCVL ALVTGSTILL 420
  421 LFHVRLERML SNMENRFSFV WFTMLETYLQ QGPANEIFRL FSTRLLISLS CIFSFMLMQF 480
  481 YGAFIVGSLL SESARSIVNL QALYDSNLAI GMENISYNFP IFTNTSNQLV RDVYVKKICK 540
  541 SGEHNIMSLQ QGAERIIQGR FAFHTAIDRM YRLLLELQMD EAEFCDLQEV MFNLPYDSGS 600
  601 VMPKGSPWRE HLAHALLHFR ATGLLQYNDK KWMVRRPDCS LFKTSQAEVD LEHFAPALFA 660
  661 LALAMVASAL VFLLELFLHW LPDFRRRLGT MST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle