YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG11198-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLITILGTLA AFLAFLLTLI FGRGQKRSKP VQSSAATSAT TATTGDSDNG NTNHNSSVIA  60
   61 ATATATTTSS KPPIAPAAPP SAVKASDKRF PKACIKKVQF SSESLRSDVD ELCDQLKDSA 120
  121 LSNLSNDNIR IACHQNNNNS SINKNQNNNS IDISISISKM SETNESNDTA AQSAEGERPS 180
  181 FLVGDEIDER AAEAGEACDE FPLKMQNDVR QNGDISERRK RLRPSMSRGT GLGQDRHQDR 240
  241 DFHIATTEEF VKRFGGTRVI NKVLIANNGI AAVKCMRSIR RWAYEMFKNE RAIRFVVMVT 300
  301 PEDLKANAEY IKMADHYVPV PGGSNNNNYA NVELIVDIAL RTQVQAVWAG WGHASENPKL 360
  361 PELLHKEGLV FLGPPERAMW ALGDKVASSI VAQTAEIPTL PWSGSDLKAQ YSGKKIKISS 420
  421 ELFARGCVTN VEQGLAAVNK IGFPVMIKAS EGGGGKGIRR VDTTEEFPGL FRQVQAEVPG 480
  481 SPIFVMKLAR GARHLEVQLL ADQYGNAISL FGRDCSIQRR HQKIIEEAPA IVAQPEVFED 540
  541 MEKAAVRLAK MVGYVSAGTV EYLYDPEGRY FFLELNPRLQ VEHPCTEMVA DVNLPAAQLQ 600
  601 IGMGIPLYRL KDIRLLYGES PWGSSVIDFE NPPNKPRPSG HVIAARITSE NPDEGFKPSS 660
  661 GTVQELNFRS SKNVWGYFSV AASGGLHEFA DSQFGHCFSW GENRQQAREN LVIALKELSI 720
  721 RGDFRTTVEY LITLLETNRF LDNSIDTAWL DALIAERVQS EKPDILLGVM CGSLHIADRQ 780
  781 ITESFSSFQT SLEKGQIQAA NTLTNVVDVE LINDGIRYKV QAAKSGANSY FLLMNSSFKE 840
  841 IEVHRLSDGG LLISLEGASY TTYMKEEVDR YRIVIGNQTC VFEKENDPSL LRSPSAGKLI 900
  901 NMIVEDGAHV SKGQAYAEIE VMKMVMTLTS QEAGTVTFVR RPGAVLDAGS LLGHLELDDP 960
  961 SLVTKAQPFK GQFLQPENAP VPEKLNRVHN TYKSILENTL AGYCLPEPFN AQRLRDIIEK1020
 1021 FMQSLRDPSL PLLELQEVIA SISGRIPISV EKKIRKLMTL YERNITSVLA QFPSQQIASV1080
 1081 IDSHAATLQK RADRDVFFLT TQSIVQLVQR YRNGIRGRMK AAVHELLRQY YDVESQFQYG1140
 1141 HYDKCVGLVR EHNKDDMQTV VNTIFSHSQV AKKNLLVTLL IDHLWANEPG LTDELANTLS1200
 1201 ELTSLNRAEH SRVALRSRQV LIAAHQPAYE LRHNQMESIF LSAVDMYGHD FHPENLQRLI1260
 1261 LSETSIFDIL HDFFYHSNRA VCNAALEVYV RRAYTSYELT CLQHLELSGG LPLVHFQFLL1320
 1321 PTAHPNRLFS RMSSPDGLDQ AAAESLGNSF VRTGAIAAFD SFEHFEMYSD EILDLLEDFV1380
 1381 SPAMVNAKVL EAVEAADSIS DSRHSTSINV SLSDPVTRAN AAEEAKSTEP IHIVSVAVRE1440
 1441 TGELDDLQMA QIFGNYCQEH NEELFQRRIR RITFAALKKR QFPKFFTFRA RDKFTEDRIY1500
 1501 RHLEPASAFH LELNRMKTYD LEALPTANQK MHLYLGKAKV SKGQEVTDYR FFIRSIIRHS1560
 1561 DLITKEASFE YLQNEGERVL LEAMDELEVA FSHPHAKRTD CNHIFLNFVP TVIMDPAKIE1620
 1621 ESVTKMIMRY GPRLWKLRVL QAELKMVIRQ SPQSPTQAVR LCIANDSGYF LDISMYTEQT1680
 1681 EPETGIIKFK AYGEKQGSLH GHPISTPYMT KDFLQQKRFQ AQSNGTTYVY DVPDMFRQMT1740
 1741 ERHWREFSKA RPTVDIRTPD KILIECKELV LEGDNLVEMQ RLPGENNCGM VAWRIVLATP1800
 1801 EYPNGREIIV IANDLTYLIG SFGIKEDVLF AKASQLARQL KVPRIYISVN SGARIGLAEE1860
 1861 VKAMFKIAWE DPEEPDKGFK YLYLSTEDYA QVANLNSVRA ILIEDEGEQR YKITDIIGKD1920
 1921 DGLGVENLRY AGLIAGETSQ AYEEIVTIAM VTCRTIGIGS YVVRLGQRVI QIDNSHIILT1980
 1981 GYAALNKLLG RKVYASNNQL GGTQIMFNNG VTHKTEAIDL DGVYTILDWL SYIPAYIGCD2040
 2041 LPIVLPNDRI ERPVDFMPTK SPYDPRWMLG GRVNPVNAND WENGFFDRDS WSEIMASWAK2100
 2101 TVVTGRARLG GVPVGVIAVE TRTVEVEMPA DPANLDSEAK TLQQAGQVWY PDSSYKTAQA2160
 2161 IKDFGREELP LIVFANWRGF SGGMKDMYEQ IVKFGAYIVD GLREYKKPVL IYLPPNAELR2220
 2221 GGAWAVLDSL INPRYMETYA DPEARGGVLE PEGIVEIKYK EKDLVKTIHR LDPTTIALKK2280
 2281 ELDEANASGD KVRAAQVDEK IKARIAVLMH VYHTVAVHFA DLHDTPERML EKECISEIVP2340
 2341 WRDSRRWLYW RLRRLLLEDA YIKKILRAQD NLSVGQAKQM LRRWLVEEKG ATEAYLWDKN2400
 2401 EEMVSWYEEQ INAESIVSRN VNSVRRDAII STISKMLEDC PDVALDAVVG LCQGLTPVNR2460
 2461 GVVVRTLAQM QLNEETSNSN QG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle