YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSR1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFISSILCC SSETTQSNSN SAYRQQQSSS LNKNRSVKHS NTKSRTRGVH QTNSPPSKTN  60
   61 SAATFSSTER STGKSGISTN DNEKKKPSSP TAAVTATTTN NMTKVEKRIS KDDLYEEKYE 120
  121 VDEDEEIDDE DNRRSRGIVQ EKGDAVKDTS RQKKQQQQQQ QQSQPQPQPQ SQSQSQSQSQ 180
  181 SQQRGPTVQV SSDHLIQDMN LSRVSSSSQA SETSNDADDE DDEDEEYIDL TLLQQGQYHA 240
  241 PGYNTLLPPQ DESTKGKKCL ILDLDETLVH SSFKYLRSAD FVLSVEIDDQ VHNVYVIKRP 300
  301 GVEEFLERVG KLFEVVVFTA SVSRYGDPLL DILDTDKVIH HRLFREACYN YEGNYIKNLS 360
  361 QIGRPLSDII ILDNSPASYI FHPQHAIPIS SWFSDTHDNE LLDIIPLLED LSVKTSLDVG 420
  421 KILDVTI

Type	Start	End	Confidence
Signal Peptide	1	17	0.67
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	427	0.99