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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7470855
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWQPVSPLN ADQLNYQGSY DPKLVLLSVA IAIFTAYMAF LMASSALSLP GRWSRKIALA  60
   61 LSGTVMGLGI WAMHFIGMLG FELPCPISYD PLITFISVIP AIAASIYALN FLSFQAPTAK 120
  121 NLMVGAIWFG LGIGTMHYSG MAALELHGNI YYELPLFVLS LVIAVMLAFV ALLFRFHSAK 180
  181 IFHTTHGPAL GSSALVMGLS TSGMHYTAMT ATHFICRPWG EFFIQGIDIQ EVAIAVTISI 240
  241 TLLTGGVMLF VLREISIQNQ QQKILVATES WYRQIIEYAP EGIMVLDAQG NIILANTSIE 300
  301 KLFGYSQTEL IGQSIALLGL AELLQQSLHL LQEGEDVGPT CPLDQEEFEI LGTRYDGSEF 360
  361 PIEVSLTSLP SLSQREMNIF ASVRDISARQ EAQQQILRQR EHLQSVLDSA PVGVAITVNG 420
  421 ITQFANPHIG ELVDLKVGDS PQKIYVDLGD RQQMLEELTQ FGRSQSRVYK MYNPRGEIRD 480
  481 ILATFLATDY EGQKGILGWL ADITPIKAAE AEMKRAKELA EEASRIKADF LANMSHEIRT 540
  541 PMNAVIGMTH LALKTDLTPR QREYLHKIRF SGQHLLGVIN DILDFSKIEA GKLPMESIDF 600
  601 DLDKVLDNVA TLISEKATNK GLELLFDIDR NLPRHFIGDP LRLGQILINY ANNAVKFTEQ 660
  661 GDITIVVRLQ EYRDQDVVLY LAVKDTGIGI KPEHIANLFN SFQQADSSTT RNFGGTGLGL 720
  721 AICKRIAELM GGEVGVESEY GQGSTFWAKV CLQKSNVIPH RLVLSKDLEG KRVLVVDDND 780
  781 HARLVMKDLL EQMKFVVETV ESGPEALNFL AEADRENHPH SIVFIDWQMP NMDGLEVARR 840
  841 LKAMGLNHQP SIFIVTAYGR EELFVKAKSL GIDDVLVKPI SPSVLFDSLA RVLGDPTALA 900
  901 QEMRQSSGIG AEDLALEKLR RIRGARILLV EDNEINQEVA AELLRDVGFN VDVAANGLIA 960
  961 LERLNNNAYA LVLMDMQMPE MDGIEATIAI RQNPRYAQLP IVAMTANVMQ GDRERCLQAG1020
 1021 MNDHLGKPIE PEELWNKLLH WIPVDSPLAP ETIEESAINT SDPEISIPHI PGLNSDDGLR1080
 1081 RVLGKKSLYL KMLHKFVASQ SSFLPEITQA LGEKDYGFAE RLAHTLKGVA GNIGAQELQQ1140
 1141 EAAELEKAIK EQWPQPEVEN LLTNLGDRLD NLIAQLTSNL PPEPATVAIT LDQGQLEEIC1200
 1201 DHLAQLLGED DAEAADLLQN HGDLLRQAFP DHYSAIAAGI NNFDFEAALA ALTTARQFSQ1260
 1261 P

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