YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DAND5_MOUSE
Organism: Mus musculus
Length: 185 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAND5_MOUSE.

Description E-value Query
Range
Subject
Range
DAND5 - DAN domain family, member 5
192.0 [0..1] [184..1]
gi|114675666 - gi|114675666|ref|XP_001170597.1| PREDICTED: hypothetical protein [Pan troglodytes]
188.0 [0..1] [184..1]
gi|109111501 - gi|109111501|ref|XP_001110846.1| PREDICTED: similar to cerberus 1 [Macaca mulatta]
178.0 [0..30] [184..96]
gi|109508622, gi... - gi|109508622|ref|XP_001071344.1| PREDICTED: similar to DAN domain family, member 5 [Rattus norvegicu...
175.0 [0..1] [185..1]

Back

Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRSQFTTLL GLFSGAWLPT GSGRPGAPAT PVQSGTAINQ SWTLDPLVPI SALGSWEAFL  60
   61 GLQNKQQGTG ELQGGGQRVA AGVPLPLAPQ EVLQETCKAL SFVQVISRPG CTSARVLNHL 120
  121 CFGRCSSFYI PSSDPTPVVF CNSCVPARKR WTSVTLWCGA GQLASPRRVR ISTVLVQKCQ 180
  181 CRPKL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 1m4uA
Description: Noggin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
receptor serine/threonine kinase binding 2.61683486163082 bayes_pls_golite062009
receptor binding 2.47511349613439 bayes_pls_golite062009
transforming growth factor beta receptor binding 2.39976050758366 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase binding 2.39976050758366 bayes_pls_golite062009
binding 2.25218361714745 bayes_pls_golite062009
protein binding 1.92369246162193 bayes_pls_golite062009
growth factor activity 1.4973683227451 bayes_pls_golite062009
protein dimerization activity 0.878571015119069 bayes_pls_golite062009
protein homodimerization activity 0.678907830578514 bayes_pls_golite062009
identical protein binding 0.534614201318531 bayes_pls_golite062009
growth factor binding 0.4409182799008 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle