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View Structure Prediction Details

Protein: CG7741-PA
Organism: Drosophila melanogaster
Length: 545 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7741-PA.

Description E-value Query
Range
Subject
Range
gi|114632335 - gi|114632335|ref|XP_507980.2| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
395.0 [0..23] [545..3]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQVGSTNMM KIQSIAQLSI TMDAGTKILV VGDVRGRFKQ LFQRVEQVNK KAGPFEILCC  60
   61 VGDFFGEDKQ NEELIAYKNG FKHITVPTYI LGPNQREHEK YFENLTDGEI CTNLTYLGRR 120
  121 GVYTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1wao1
Description: PP5 structure
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [126-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSGVKIAYLS GLEAQGTADS AGSEHEFTKA DVIAVRNSCL VSKNCSTEYR GVDVLLTSQW  60
   61 PFGMQEKENA TASKLVSFLC REIKPRYHFC AINGTHYESA PFRMPKDETT QFELCTRFIS 120
  121 LAEVGNAEKA KYIYALSLKP VDKSRLLDLA QKTTNEIPCP FIGLDLGGAI GKNDSSENRQ 180
  181 YFYDMDGGRR KRQGGDNNKR DKRPRIPQIE QDKCWFCLSS PDVEKHLIIT VGEHFYLALA 240
  241 KGPINKHHVM ILSTKHVPCA AQLSPDDWKE LNKFKAALRK FFKTLGQVVC FTERHYKSVH 300
  301 LQINALAFEE GYAWKIKHSF EDKAEEF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 1hxqA
Description: Galactose-1-phosphate uridylyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleic acid binding 1.24536295645879 bayes_pls_golite062009
binding 1.12315862086587 bayes_pls_golite062009
catalytic activity 0.096119422680995 bayes_pls_golite062009
protein binding 0.0847290693390839 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [453-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLEFETLPAL DSEKMLPEMG PYFLAELPDD STLITRQMKH FPIHFARDVF CSENLLNCDE  60
   61 KVNWKDCLLD KDEEVAYVED FRKAFAPFDF TDD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.886057
Match: PF04676.5
Description: No description for PF04676.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.878 N/A N/A d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle