| Protein: | ca-PA, FBpp0311230 |
| Organism: | Drosophila melanogaster |
| Length: | 1961 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ca-PA, FBpp0311230.
| Description | E-value | Query Range |
Subject Range |
|
|
2435.0 | [0..1] | [1961..1] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MSGQAELKEL GMFELRPLIT NISCKLSAVT AGLDEKRQFL CLVSEENEIL LRYISAASGQ 60
61 EVVKMISWFR NRVIHDVCFD PAGVWLLVLC FDNTLHIVPA LALVDKAHGL SACSLYSTTQ 120
121 VTSYIIPFVG PHECPNSKKC P
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-381] |
1 11 21 31 41 51
| | | | | |
1 NHSTGLEEST AEPMDQLAEN LEQARLQEGE EEEPLGHDLP EHMLVRNSGT EDAVQPLPQQ 60
61 QQTIDTTGNS QVMAASFMAS KTCPYPLSVV WWKTNSGQNR AIIGYSDGSI CFVGLSPNCP 120
121 MIASTAIENG SVMRLVICKD KAYDGVMLLI TSSLKQQYKL LLEQKAIKYV YPGDSSPTTR 180
181 EGAWQIVMSV QDKHQSAATG ARQSNSSDPA SDSSQLEEDV FAPPSSDDVV CSGPGAANSD 240
241
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [382-624] |
1 11 21 31 41 51
| | | | | |
1 PSTVSASAEA ATADVPPPPA PPSYSEAVAR QSGDQGGVRF QQQQLPAGSM DGILPATRAR 60
61 LASLKSLGSK KLQAIKMRLS DQRQKFDEFM PDSTMGSFAI MDSPSVTPEP LGTTSGSFYN 120
121 IQNLRSTFLL SALHSNSHSL TVHSIDISLK PLFVYKIPKH TQEILISSNI LYGIHYVDLH 180
181 CRSDSDHFTA ASLLDDPLVA NTEKENRDAD IEKVDQSDVS AQKSDSTSAT TTATSSLDQS 240
241 DMP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [625-862] |
1 11 21 31 41 51
| | | | | |
1 STAINAVSVI SSAMASLHTS DEDRFNNLAQ LGLFRFENET VLHLYQMAQY RNPSAEPETL 60
61 TKEEKAKAFE LKDIHTPMDY IQFYETADVS SEFSLRQMEI MQSEFPKINY DPSYVITNKN 120
121 VYTIQLKKEP FELFLDAALQ NEFNQCRDFC NTFDLSFEQC IEFAGDYLLR RKKITQALLT 180
181 YNKARVKPIR TALKLAMYGH TYALMQLSAM ALKSTYLLRS RYLGHPLLKG ILGDITYR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [863-927] |
1 11 21 31 41 51
| | | | | |
1 HSEDVRVILP EKHEEEDVNS GVFCSDYHYG VDESISALQM SPSSQFHLAN LLLITLAEKA 60
61 VNDKN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [928-1147] |
1 11 21 31 41 51
| | | | | |
1 YIPLWNFLVT NSKYHTNMTS IVLCQSGLFS SAIILAKIRG VCLDTFNALI SVVAQEFGWY 60
61 NELNVCLYNL SENIFLETIT YLPHVSMDYF AFIQEKLHHI RPCVLQRLSK QLNPFSPALR 120
121 PIVSHNSDCA MSNDNNPQLF EFCKSLIETY LAVLIHMESQ RVKYDSIVNA LSNFRINYED 180
181 NQFAIESSRF KPISAGCAYC ACVVDGTAYF WGSSGIPSYY
|
| Detection Method: | |
| Confidence: | 33.09691 |
| Match: | 1jtdB |
| Description: | beta-lactamase inhibitor protein-II, BLIP-II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1148-1627] |
1 11 21 31 41 51
| | | | | |
1 SAQKSTEPPE PAHAVKSLDL LSQLNLQVHA IKCGRQHTLI LTNNGLYSLG NNNLCQLGIG 60
61 RHMQMALQPM LVTALDGMNI TMLEAGQYHN AAVADGKLYM WGWGIYGQLG QGSCENIATP 120
121 QLVSFFKFKK ILQISLGHAH TLVLCGAPNS HMEANHCGNE LFVFGSNHFG QLGTGNSDHG 180
181 DTKTNLPVRL EVGDCSLRLI HTKFFTNLAV DEQDRLFTWG SSPQALRLAN QIKRRANAKQ 240
241 KMEENQQREL LSKQLEATLL PAPIPSTSTL VEPTTSYAAV VAGSTPKSSV SDTKDCQDVQ 300
301 NEAAPSDATE TIAPASAKAA PPPVPVASPP VLVPEPDPTE HLTPHLVDTS EVAGRILQIS 360
361 SGLFHFCLIS SSCTLYTWGK NLEHQLGTED KDRRAVLKPS PIDSIERPMY VDCGSDFTLV 420
421 MTTDHVVRAF GGNSNGQCGR DLGPSVERMR QRVVCLPATK RLVRFESQCV EVPVEINLPR 480
481
|
| Detection Method: | |
| Confidence: | 84.09691 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.632410858101154 | bayes_pls_golite062009 |
| binding | 0.460156286872512 | bayes_pls_golite062009 |
|
Region A: Residues: [1628-1813] |
1 11 21 31 41 51
| | | | | |
1 PRIRLDQDPV RYLKVMPPYQ PHFLQPANIS FDQHCSVGTP NYKSSTEHAA TGQDSDDMLS 60
61 SLENLSQNDA SFSYNAPVLG DAHSSLDMDY TPEEQSYVPL PEQAVGSGMP ANAEQLLGRD 120
121 DDDGSTYTQS TEGMGESSLQ HLRHYIHYCL YAFHGLYNPD KIGECARPHR NEYRIRICML 180
181 NFRFVE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1814-1961] |
1 11 21 31 41 51
| | | | | |
1 AFRLCLQSCG SAQRTLKLFE YFSKDTGYVP LRRTDLKHLI YHLCLHFLER KFDMLECERF 60
61 FMGDLDYYLL ELAYVFYFNN NNSTLEQNLN QKFKQLIAAA DSNQAATSAG QELEQLQDTD 120
121 VIFDSFTVKF KTILCQRLLS YSDCDAAN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
