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View Structure Prediction Details

Protein: asl-PA
Organism: Drosophila melanogaster
Length: 994 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asl-PA.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
408.0 [0..5] [992..1856]

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Predicted Domain #1
Region A:
Residues: [1-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTPGISLFQ GADALNINST LDRQEEEEAL QDQKRREEEL GRIMVNAFDD LLDEENTIDS  60
   61 TTNYQSELEQ PPVLPNYPSH PHHKPLQDDA QRANEIEMHR LQILLESKNN ELQNVNQVAN 120
  121 AAHKKLDDLQ KHLSIMQAEL DRAIREKQNT HELLVETKET CSNKDSDLDK LRSEKKQLEE 180
  181 DNTRLVGQLE AAKTLLTDVQ SKYDMVQASK QKWEERNADL RLKQMEEAHR AQSDLLQQQL 240
  241 CQMKDQLDRK QNELDQINSR YNALQSGHET MLVDKAAKIN ELSQALDEAQ MRCNQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [296-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSARPDLQAE NRRQQQCIVD LKARIAYLEQ TVASLHERLN ETTTELDLID SVIQQHQADE  60
   61 SPTSRLSQMG GSRLVG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.09691
Match: 1c1gA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [372-901]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STPLNPLDRV GHIKQELYRA LGNLKNKREE VRRLEKLLEE RNQELRVLRD QENQSLVQLE  60
   61 TLNEGKMRLE NKVKAMQQEL EEQKHRSQQE SDVHSQLNSI VAERDALREK RQQIEEDLEQ 120
  121 LKQQNESLQR NYDQLSQENR QLRTRETADN LRLELERHKI LLRDSQSEVE RLKKLYSDIA 180
  181 TDKESLGYEL RKLRESDTLK ELQDQRQNLA TVQRNLQLAE MKSEELKKLL ETEKLSHERD 240
  241 LQALRQRSER EKREEAVAVA KESSENCSKC IESIAEITKA EIQLLKLQNV NSMQAKELKE 300
  301 LEHALEQSKN LQAEMQEKIE LSNKQDELIS DLKERAKQFE AYIRQQEEHK QQNKCTPSPK 360
  361 SNSVSPSDPS PKELTQNRIR LIEQRVRDEM AKLFAAELKR FTNRLQKSEE RSQCLQREYQ 420
  421 TVCAELQQRQ TEVDLLKQTI LAERENIDEI LAGREEKQKE MLQKCRQELQ AKNQRIAELL 480
  481 REVEEQHASI DSERQSMKAV MAQWEKQRQS VDQVEHHWRQ QLESLRSTHE 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.971
Match: 1hciA
Description: alpha-actinin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.230804607057959 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [902-994]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAMRSAQQRY QSAKRTAHNY KLYAEDKEAH MKREYERIKH EYELSLAKIE ATMNQHLERR  60
   61 SREKHRDKEN VPSNSSSDPI TNSNRKPKGN GHS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.99
Match: 1yvlA
Description: Structure of Unphosphorylated STAT1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle