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View Structure Prediction Details

Protein: gi|20986495, gi|...
Organism: Homo sapiens
Length: 684 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20986495, gi|....

Description E-value Query
Range
Subject
Range
GON4L - gon-4-like (C. elegans)
0.0 [1..682] [656..1338]
gi|114560148 - gi|114560148|ref|XP_513864.2| PREDICTED: Dingo protein [Pan troglodytes]
0.0 [1..682] [656..1338]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKPSAKQQK EVEKVKPQCK EVHQTLILDP AQRKRLQQQM QQHVQLLTQI HLLATCNPNL  60
   61 NPEASSTRIC LKELGTFAQS SIALHHQYNP KFQTLFQPCN LMGAMQLIED FSTHVSIDCS 120
  121 PHKTVKKTAN E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPCLPKQVAW ILATSKVFMY PELLPVCSLK AKNPQDKILF TKAEDNLLAL GLKHFEGTEF  60
   61 LNPLISKYLL TCKTARQLTV RIKNLNMNRA PDNIIKFYKK T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [233-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQLPVLGKCC EEIQPHQWKP PIEREEHRLP FWLKASLPSI QEELRHMADG AREVGNMTGT  60
   61 TEINSDQGLE KDNSELGSET RYPLLLPKGV VLKLKPVADR F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [334-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKKAWRQKRS SVLKPLLIQP SPSLQPSFNP GKTPAQSTHS EAPPSKMVLR IPHPIQPATV  60
   61 LQTVPGVPPL GVSGGESFES PAALPAMPPE ARTSFPLSES QTLLSSAPVP KVMMPSPASS 120
  121 MFRKPYVRRR PSKRRGARAF RCIKPAPVIH PASVIFTVP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [493-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATTVKIVSLG GGCNMIQPVN AAVAQSPQTI PIATLLVNPT SFPCPLNQPL VASSVSPLIV  60
   61 SGNSVNLPIP STPEDKAHMN VDIACAVADG ENAFQGLEPK LEPQELSPLS ATVFPKVEHS 120
  121 PGPPPVDKQC QEGLSENSAY RWTVVKTEEG RQALEPLPQG IQESLNNSSP GDLEEVVKME 180
  181 PEDATEEISG FL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle