Protein: | gi|42403585 |
Organism: | Homo sapiens |
Length: | 372 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42403585.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..371] | [2507..2864] |
|
0.0 | [1..367] | [345..691] |
|
0.0 | [1..371] | [223..580] |
|
0.0 | [1..365] | [318..662] |
|
0.0 | [1..371] | [216..573] |
Region A: Residues: [1-222] |
1 11 21 31 41 51 | | | | | | 1 MTRRGFSRAG AAQRSTRPAA EPQPPAARAL QPRPGVPGPL RCREYLQPPA PRREAEGLSH 60 61 QGSEVGAESG ARPKERGAEP ELGRLVAEKP GVKMTERFDC HHCNESLFGK KYILREESPY 120 121 CVVCFETLFA NTCEECGKPI GCDCKDLSYK DRHWHEACFH CSQCRNSLVD KPFAAKEDQL 180 181 LCTDCYSNEY SSKCQECKKT IMPGTRKMEY KGSSWHETCF IC |
Detection Method: | |
Confidence: | 43.09691 |
Match: | 2i13A |
Description: | No description for 2i13A was found. |
Region A: Residues: [223-288] |
1 11 21 31 41 51 | | | | | | 1 HRCQQPIGTK SFIPKDNQNF CVPCYEKQHA MQCVQCKKPI TTGGVTYREQ PWHKECFVCT 60 61 ACRKQL |
Detection Method: | |
Confidence: | 12.09691 |
Match: | 2gliA |
Description: | Five-finger GLI1 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
transcription activator activity | 3.52873291636993 | bayes_pls_golite062009 |
transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
binding | 3.10743787485868 | bayes_pls_golite062009 |
sequence-specific DNA binding | 2.53101891154822 | bayes_pls_golite062009 |
cytoskeletal protein binding | 2.22104591928521 | bayes_pls_golite062009 |
chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
protein binding | 2.05530362750351 | bayes_pls_golite062009 |
transcription repressor activity | 1.64349785387632 | bayes_pls_golite062009 |
specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
molecular transducer activity | 1.12277938241964 | bayes_pls_golite062009 |
signal transducer activity | 1.12277938241964 | bayes_pls_golite062009 |
structure-specific DNA binding | 0.93314267845352 | bayes_pls_golite062009 |
transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
tubulin binding | 0.744315484113484 | bayes_pls_golite062009 |
microtubule binding | 0.576452165256057 | bayes_pls_golite062009 |
double-stranded DNA binding | 0.53991278722671 | bayes_pls_golite062009 |
receptor activity | 0.36635758793995 | bayes_pls_golite062009 |
catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
transcription corepressor activity | 0.10558148421807 | bayes_pls_golite062009 |
Region A: Residues: [289-372] |
1 11 21 31 41 51 | | | | | | 1 SGQRFTARDD FAYCLNCFCD LYAKKCAGCT NPISGLGGTK YISFEERQWH NDCFNCKKCS 60 61 LSLVGRGFLT ERDDILCPDC GKDI |
Detection Method: | |
Confidence: | 3.522879 |
Match: | 2egqA |
Description: | No description for 2egqA was found. |