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View Structure Prediction Details

Protein: gi|158260715, gi...
Organism: Homo sapiens
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|158260715, gi....

Description E-value Query
Range
Subject
Range
gi|123992107, gi... - gi|123999436|gb|ABM87277.1| FGFR1 oncogene partner [synthetic construct], gi|123992107|gb|ABM83963.1...
gi|15080276 - gi|15080276|gb|AAH11902.1| FGFR1 oncogene partner [Homo sapiens]
0.0 [11..379] [11..379]
FR1OP_MACFA - FGFR1 oncogene partner OS=Macaca fascicularis GN=FGFR1OP PE=2 SV=1
0.0 [11..379] [11..379]
gi|26327165, gi|... - gi|47777353|ref|NP_957682.1| Fgfr1 oncogene partner [Mus musculus], gi|26341136|dbj|BAC34230.1| unna...
0.0 [13..379] [13..379]
FR1OP_RAT - FGFR1 oncogene partner OS=Rattus norvegicus GN=Fgfr1op PE=1 SV=1
0.0 [13..379] [13..399]
gi|114610226 - gi|114610226|ref|XP_527596.2| PREDICTED: similar to FGFR1 oncogene partner (FOP) [Pan troglodytes]
0.0 [11..379] [11..399]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAAAVVA EEDTELRDLL VQTLENSGVL NRIKAELRAA VFLALEEQEK VENKTPLVNE  60
   61 SLKKFLNTKD GRLVASLVAE FLQFFNLDFT LAVFQPETST LQGLEGRENL ARDLGIIEAE 120
  121 GTVGGPLLLE VIRRCQQKEK GPTTGEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.30103
Match: 2d68A
Description: No description for 2d68A was found.

Predicted Domain #2
Region A:
Residues: [148-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALDLSDVHSP PKSPEGKTSA QTTPSKKAND EANQSDTSVS LSEPKSKSSL HLLSHETKIG  60
   61 SFLSNRTLDG KDKAGLCP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [226-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEDDMEGDSF FDDPIPKPEK TYGLRKEPRK QAGSLASLSD APPLKSGLSS LAGAPSLKDS  60
   61 ESKRGNTVLK DLKLISDKIG SLGLGTGEDD DYVDDFNSTS HRSEKSEISI GEEIEEDLSV 120
  121 EIDDINTSDK LDDLTQDLTV SQLSDVADYL EDVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle