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View Structure Prediction Details

Protein: gi|158260715, gi...
Organism: Homo sapiens
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|158260715, gi....

Description E-value Query
Range
Subject
Range
gi|123992107, gi... - gi|123999436|gb|ABM87277.1| FGFR1 oncogene partner [synthetic construct], gi|123992107|gb|ABM83963.1...
gi|15080276 - gi|15080276|gb|AAH11902.1| FGFR1 oncogene partner [Homo sapiens]
0.0 [11..379] [11..379]
FR1OP_MACFA - FGFR1 oncogene partner OS=Macaca fascicularis GN=FGFR1OP PE=2 SV=1
0.0 [11..379] [11..379]
gi|26327165, gi|... - gi|47777353|ref|NP_957682.1| Fgfr1 oncogene partner [Mus musculus], gi|26341136|dbj|BAC34230.1| unna...
0.0 [13..379] [13..379]
FR1OP_RAT - FGFR1 oncogene partner OS=Rattus norvegicus GN=Fgfr1op PE=1 SV=1
0.0 [13..379] [13..399]
gi|114610226 - gi|114610226|ref|XP_527596.2| PREDICTED: similar to FGFR1 oncogene partner (FOP) [Pan troglodytes]
0.0 [11..379] [11..399]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAAAVVA EEDTELRDLL VQTLENSGVL NRIKAELRAA VFLALEEQEK VENKTPLVNE  60
   61 SLKKFLNTKD GRLVASLVAE FLQFFNLDFT LAVFQPETST LQGLEGRENL ARDLGIIEAE 120
  121 GTVGGPLLLE VIRRCQQKEK GPTTGEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.30103
Match: 2d68A
Description: No description for 2d68A was found.

Predicted Domain #2
Region A:
Residues: [148-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALDLSDVHSP PKSPEGKTSA QTTPSKKAND EANQSDTSVS LSEPKSKSSL HLLSHETKIG  60
   61 SFLSNRTLDG KDKAGLCP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [226-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEDDMEGDSF FDDPIPKPEK TYGLRKEPRK QAGSLASLSD APPLKSGLSS LAGAPSLKDS  60
   61 ESKRGNTVLK DLKLISDKIG SLGLGTGEDD DYVDDFNSTS HRSEKSEISI GEEIEEDLSV 120
  121 EIDDINTSDK LDDLTQDLTV SQLSDVADYL EDVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle