| Protein: | gi|500638, gi|33... |
| Organism: | Homo sapiens |
| Length: | 341 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|500638, gi|33....
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-44 | [4..330] | [186..520] |
|
|
1.0E-42 | [4..327] | [186..518] |
|
|
1.0E-42 | [4..330] | [186..521] |
|
|
2.0E-42 | [4..330] | [186..521] |
|
|
3.0E-42 | [3..198] | [7..202] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MEREKEQFRK LFIGGLSFET TEESLRNYYE QWGKLTDCVV MRDPASKRSR GFGFVTFSSM 60
61 AEVDAAMAAR PHSIDGRVVE PKRAVAREES GKPGAHVTVK KLFVGGIKED TEEHHLRDYF 120
121 EEYGKIDTIE IITDRQSGKK RGFGFVTFDD HDPVDKIVLQ KYHTINGHNA EVRKALSRQE 180
181 MQE
|
| Detection Method: |  |
| Confidence: | 43.0 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [184-341] |
1 11 21 31 41 51
| | | | | |
1 VQSSRSGRGG NFGFGDSRGG GGNFGPGPGS NFRGGSDGYG SGRGFGDGYN GYGGGPGGGN 60
61 FGGSPGYGGG RGGYGGGGPG YGNQGGGYGG GYDNYGGGNY GSGNYNDFGN YNQQPSNYGP 120
121 MKSGNFGGSR NMGGPYGGGN YGPGGSGGSG GYGGRSRY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
