YRC Public Data Repository - Protein Structure Prediction

Protein:	YJEE_ECOLI
Organism:	Escherichia coli
Length:	153 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJEE_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|110644525, gi... - gi\|110644525\|ref\|YP_672255.1\| putative ATPase [Escherichia coli 536], gi\|110346117\|gb\|ABG72354.1\| pu... gi\|237703835, gi... - gi\|237703835\|ref\|ZP_04534316.1\| conserved hypothetical protein [Escherichia sp. 3_2_53FAA], gi\|22690... gi\|91213717, gi\|... - gi\|91213717\|ref\|YP_543703.1\| putative ATPase [Escherichia coli UTI89], gi\|91075291\|gb\|ABE10172.1\| hy... gi\|115515639, gi... - gi\|117626515\|ref\|YP_859838.1\| putative ATPase [Escherichia coli APEC O1], gi\|115515639\|gb\|ABJ03714.1... gi\|75236179, gi\|... - gi\|75236179\|ref\|ZP_00720301.1\| COG0802: Predicted ATPase or kinase [Escherichia coli F11], gi\|191174... gi\|218561327, gi... - gi\|218561327\|ref\|YP_002394240.1\| putative ATPase [Escherichia coli S88], gi\|218368096\|emb\|CAR05903.1...	221.0	[0..1]	[153..1]
gi\|188488933, gi... - gi\|75515407\|ref\|ZP_00737564.1\| COG0802: Predicted ATPase or kinase [Escherichia coli 53638], gi\|1884...	220.0	[0..1]	[153..1]
gi\|16505484, gi\|... - gi\|25326454\|pir\|\|AE1048 conserved hypothetical protein yjeE [imported] - Salmonella enterica subsp. ... gi\|16763176 - gi\|16763176\|ref\|NP_458793.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Typhi str.... gi\|238910515 - gi\|238910515\|ref\|ZP_04654352.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Tenness... gi\|29140294, gi\|... - gi\|29144655\|ref\|NP_807997.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Typhi str.... gi\|62182803, gi\|... - gi\|62182803\|ref\|YP_219220.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Choleraesu... gi\|214003364 - gi\|214003364\|ref\|ZP_03414099.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Typhi s... gi\|213052284 - gi\|213052284\|ref\|ZP_03345162.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Typhi s... gi\|213420175 - gi\|213420175\|ref\|ZP_03353241.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Typhi s... gi\|213586192 - gi\|213586192\|ref\|ZP_03368018.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Typhi s... gi\|213621069 - gi\|213621069\|ref\|ZP_03373852.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Typhi s... gi\|205336307, gi... - gi\|205336307\|gb\|EDZ23071.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|195632792, gi... - gi\|195632792\|gb\|EDX51246.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|194402265, gi... - gi\|194443602\|ref\|YP_002043612.1\| hypothetical protein SNSL254_A4718 [Salmonella enterica subsp. ente... gi\|205274896, gi... - gi\|205355115\|ref\|YP_002228916.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Gallin...	220.0	[0..1]	[152..1]
lcl\|NC_016856.1_... - [gene=yjeE] [protein=putative ATPase] [protein_id=YP_005240669.1] [location=4612717..4613178] gi\|16767603, gi\|... - gi\|16767603\|ref\|NP_463218.1\| putative ATPase [Salmonella typhimurium LT2], gi\|16422917\|gb\|AAL23177.1... gi\|205327105, gi... - gi\|205327105\|gb\|EDZ13869.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...	220.0	[0..1]	[152..1]
gi\|56416148, gi\|... - gi\|56416148\|ref\|YP_153223.1\| putative ATPase [Salmonella enterica subsp. enterica serovar Paratyphi ...	220.0	[0..1]	[152..1]
gi\|26111492, gi\|... - gi\|26251060\|ref\|NP_757100.1\| putative ATPase [Escherichia coli CFT073], gi\|26111492\|gb\|AAN83674.1\|AE... gi\|218430066, gi... - gi\|218692502\|ref\|YP_002400714.1\| putative ATPase [Escherichia coli ED1a], gi\|218430066\|emb\|CAR10911.... gi\|227836362, gi... - gi\|227886789\|ref\|ZP_04004594.1\| ATPase [Escherichia coli 83972], gi\|227836362\|gb\|EEJ46828.1\| ATPase ...	219.0	[0..1]	[153..1]
gi\|28899595, gi\|... - gi\|28899595\|ref\|NP_799200.1\| putative nucleotide-binding protein [Vibrio parahaemolyticus RIMD 22106... gi\|28807831 - gi\|28807831\|dbj\|BAC61084.1\| putative nucleotide-binding protein [Vibrio parahaemolyticus RIMD 221063... gi\|153840362, gi... - gi\|153840362\|ref\|ZP_01993029.1\| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810], gi\|...	215.0	[0..1]	[151..1]
gi\|91188607, gi\|... - gi\|91227457\|ref\|ZP_01261821.1\| putative nucleotide-binding protein [Vibrio alginolyticus 12G01], gi\|...	212.0	[0..1]	[151..1]
gi\|46914875, gi\|... - gi\|54310434\|ref\|YP_131454.1\| putative nucleotide-binding protein [Photobacterium profundum SS9], gi\|...	211.0	[0..1]	[151..1]
gi\|90324484, gi\|... - gi\|90414479\|ref\|ZP_01222455.1\| putative nucleotide-binding protein [Photobacterium profundum 3TCK], ...	210.0	[0..1]	[151..1]

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Predicted Domain #1

Region A:
Residues: [1-153]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNRVIPLPD EQATLDLGER VAKACDGATV IYLYGDLGAG KTTFSRGFLQ ALGHQGNVKS  60
   61 PTYTLVEPYT LDNLMVYHFD LYRLADPEEL EFMGIRDYFA NDAICLVEWP QQGTGVLPDP 120
  121 DVEIHIDYQA QGREARVSAV SSAGELLLAR LAG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	46.69897
Match:	1fl9A
Description:	Hypothetical protein HI0065
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.36550713198424	bayes_pls_golite062009
catalytic activity	0.234613562021476	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.166100211611062	bayes_pls_golite062009
pyrophosphatase activity	0.159702441149605	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.149170905385965	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.147838751017739	bayes_pls_golite062009
hydrolase activity	0.0436758932827116	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: