Protein: | YGFK_ECOLI |
Organism: | Escherichia coli |
Length: | 1032 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGFK_ECOLI.
Description | E-value | Query Range |
Subject Range |
|
1085.0 | [0..1] | [1032..1] |
|
1083.0 | [0..1] | [1032..1] |
|
1082.0 | [0..1] | [1032..1] |
|
1081.0 | [0..1] | [1032..1] |
|
1081.0 | [0..1] | [1032..1] |
|
1081.0 | [0..1] | [1032..1] |
|
1081.0 | [0..1] | [1032..1] |
|
1079.0 | [0..1] | [1032..1] |
|
1077.0 | [0..1] | [1032..1] |
|
1020.0 | [0..1] | [1032..1] |
Region A: Residues: [1-199] |
1 11 21 31 41 51 | | | | | | 1 MGDIMRPIPF EELLTRIFDE YQQQRSIFGI PEQQFYSPVK GKTVSVFGET CATPVGPAAG 60 61 PHTQLAQNIV TSWLTGGRFI ELKTVQILDR LELEKPCIDA EDECFNTEWS TEFTLLKAWD 120 121 EYLKAWFALH LLEAMFQPSD SGKSFIFNMS VGYNLEGIKQ PPMQQFIDNM MDASDHPKFA 180 181 QYRDTLNKLL QDDAFLARH |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [200-816] |
1 11 21 31 41 51 | | | | | | 1 GLQEKRESLQ ALPARIPTSM VHGVTLSTMH GCPPHEIEAI CRYMLEEKGL NTFVKLNPTL 60 61 LGYARVREIL DVCGFGYIGL KEESFDHDLK LTQALEMLER LMALAKEKSL GFGVKLTNTL 120 121 GTINNKGALP GEEMYMSGRA LFPLSINVAA VLSRAFDGKL PISYSGGASQ LTIRDIFDTG 180 181 IRPITMATDL LKPGGYLRLS ACMRELEGSD AWGLDHVDVE RLNRLAADAL TMEYTQKHWK 240 241 PEERIEVAED LPLTDCYVAP CVTACAIKQD IPEYIRLLGE HRYADALELI YQRNALPAIT 300 301 GHICDHQCQY NCTRLDYDSA LNIRELKKVA LEKGWDEYKQ RWHKPAGSGS RHPVAVIGAG 360 361 PAGLAAGYFL ARAGHPVTLF EREANAGGVV KNIIPQFRIP AELIQHDIDF VAAHGVKFEY 420 421 GCSPDLTIEQ LKNQGFHYVL IATGTDKNSG VKLAGDNQNV WKSLPFLREY NKGTALKLGK 480 481 HVVVVGAGNT AMDCARAALR VPGVEKATIV YRRSLQEMPA WREEYEEALH DGVEFRFLNN 540 541 PERFDADGTL TLRVMSLGEP DEKGRRRPVE TNETVTLLVD SLITAIGEQQ DTEALNAMGV 600 601 PLDKNGWPDV DHNGETR |
Detection Method: | |
Confidence: | 93.39794 |
Match: | 1ps9A |
Description: | The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
glutamate synthase activity | 8.25305391467034 | bayes_pls_golite062009 |
glutamate synthase activity, NADH or NADPH as acceptor | 8.23578981764913 | bayes_pls_golite062009 |
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 7.02480361242491 | bayes_pls_golite062009 |
glutamate synthase (NADPH) activity | 6.79992270958953 | bayes_pls_golite062009 |
catalytic activity | 1.13824203225664 | bayes_pls_golite062009 |
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor | 0.384435272305167 | bayes_pls_golite062009 |
oxidoreductase activity, acting on the CH-NH2 group of donors | 0.201800390587271 | bayes_pls_golite062009 |
oxidoreductase activity | 0.106121647378647 | bayes_pls_golite062009 |
Region A: Residues: [817-1032] |
1 11 21 31 41 51 | | | | | | 1 LTDVFMIGDV QRGPSSIVAA VGTARRATDA ILSRENIRSH QNDKYWNNVN PAEIYQRKGD 60 61 ISITLVNSDD RDAFVAQEAA RCLECNYVCS KCVDVCPNRA NVSIAVPGFQ NRFQTLHLDA 120 121 YCNECGNCAQ FCPWNGKPYK DKITVFSLAQ DFDNSSNPGF LVEDCRVRVR LNNQSWVLNI 180 181 DSKGQFNNVP PELNDMCRII SHVHQHHHYL LGRVEV |
Detection Method: | |
Confidence: | 65.39794 |
Match: | 1zy8A |
Description: | The crystal structure of dihydrolipoamide dehydrogenase and dihydrolipoamide dehydrogenase-binding protein (didomain) subcomplex of human pyruvate dehydrogenase complex. |
Matching Structure (courtesy of the PDB): |