Protein: | LIPA_ECO57 |
Organism: | Escherichia coli O157:H7 |
Length: | 321 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LIPA_ECO57.
Description | E-value | Query Range |
Subject Range |
|
331.0 | [0..1] | [321..1] |
|
330.0 | [0..1] | [321..1] |
|
330.0 | [0..1] | [321..1] |
|
328.0 | [0..1] | [321..1] |
|
328.0 | [0..1] | [321..1] |
|
328.0 | [0..1] | [321..1] |
|
328.0 | [0..1] | [321..1] |
|
327.0 | [0..1] | [321..1] |
|
326.0 | [0..1] | [321..1] |
|
326.0 | [0..1] | [321..1] |
Region A: Residues: [1-70] |
1 11 21 31 41 51 | | | | | | 1 MSKPIVMERG VKYRDADKMA LIPVKNVATE REALLRKPEW MKIKLPADST RIQGIKAAMR 60 61 KNGLHSVCEE |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [71-321] |
1 11 21 31 41 51 | | | | | | 1 ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPVA PDANEPVKLA QTIADMALRY 60 61 VVITSVDRDD LRDGGAQHFA DCITAIREKS PQIKIETLVP DFRGRMDRAL DILTATPPDV 120 121 FNHNLENVPR IYRQVRPGAD YNWSLKLLER FKEAHPEIPT KSGLMVGLGE TNEEIIEVMR 180 181 DLRRHGVTML TLGQYLQPSR HHLPVQRYVS PDEFDEMKAE ALAMGFTHAA CGPFVRSSYH 240 241 ADLQAKGMEV K |
Detection Method: | |
Confidence: | 55.154902 |
Match: | 1r30A |
Description: | The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
biotin synthase activity | 2.22585029668171 | bayes_pls_golite062009 |
radical SAM enzyme activity | 2.08127882819276 | bayes_pls_golite062009 |
catalytic activity | 1.85375915825216 | bayes_pls_golite062009 |
coproporphyrinogen oxidase activity | 1.27516985221578 | bayes_pls_golite062009 |
sulfurtransferase activity | 1.26112752511053 | bayes_pls_golite062009 |
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | 0.604275066192139 | bayes_pls_golite062009 |
transferase activity, transferring sulfur-containing groups | 0.35292941647096 | bayes_pls_golite062009 |