Protein: | LHR_ECOLI |
Organism: | Escherichia coli |
Length: | 1538 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LHR_ECOLI.
Description | E-value | Query Range |
Subject Range |
|
1490.0 | [0..1] | [1538..1] |
|
1484.0 | [0..1] | [1538..1] |
|
1482.0 | [0..1] | [1538..1] |
|
1481.0 | [0..1] | [1538..1] |
|
1479.0 | [0..1] | [1538..1] |
|
1479.0 | [0..1] | [1538..1] |
|
1477.0 | [0..1] | [1538..1] |
|
1477.0 | [0..1] | [1538..1] |
|
1411.0 | [0..110] | [1538..2] |
|
1306.0 | [0..1] | [1535..1] |
Region A: Residues: [1-512] |
1 11 21 31 41 51 | | | | | | 1 MADNPDPSSL LPDVFSPATR DWFLRAFKQP TAVQPQTWHV AARSEHALVI APTGSGKTLA 60 61 AFLYALDRLF REGGEDTREA HKRKTSRILY ISPIKALGTD VQRNLQIPLK GIADERRRRG 120 121 ETEVNLRVGI RTGDTPAQER SKLTRNPPDI LITTPESLYL MLTSRARETL RGVETVIIDE 180 181 VHAVAGSKRG AHLALSLERL DALLHTSAQR IGLSATVRSA SDVAAFLGGD RPVTVVNPPA 240 241 MRHPQIRIVV PVANMDDVSS VASGTGEDSH AGREGSIWPY IETGILDEVL RHRSTIVFTN 300 301 SRGLAEKLTA RLNELYAARL QRSPSIAVDA AHFESTSGAT SNRVQSSDVF IARSHHGSVS 360 361 KEQRAITEQA LKSGELRCVV ATSSLELGID MGAVDLVIQV ATPLSVASGL QRIGRAGHQV 420 421 GGVSKGLFFP RTRRDLVDSA VIVECMFAGR LENLTPPHNP LDVLAQQTVA AAAMDALQVD 480 481 EWYSRVRRAA PWKDLPRRVF DATLDMLSGR YP |
Detection Method: | |
Confidence: | 43.522879 |
Match: | 2p6rA |
Description: | No description for 2p6rA was found. |
Term | Confidence | Notes |
catalytic activity | 1.37148167194523 | bayes_pls_golite062009 |
binding | 0.556857559334679 | bayes_pls_golite062009 |
hydrolase activity | 0.310795123901245 | bayes_pls_golite062009 |
Region A: Residues: [513-691] |
1 11 21 31 41 51 | | | | | | 1 SGDFSAFRPK LVWNRETGIL TARPGAQLLA VTSGGTIPDR GMYSVLLPEG EEKAGSRRVG 60 61 ELDEEMVYES RVNDIITLGA TSWRIQQITR DQVIVTPAPG RSARLPFWRG EGNGRPAELG 120 121 EMIGDFLHLL ADGAFFSGTI PPWLAEENTI ANIQGLIEEQ RNATGIVPGS RHLVLERCR |
Detection Method: | |
Confidence: | 5.522879 |
Match: | 1tf2A |
Description: | Crystal structure of SecA:ADP in an open conformation from Bacillus Subtilis |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [692-905] |
1 11 21 31 41 51 | | | | | | 1 DEIGDWRIIL HSPYGRRVHE PWAVAIAGRI HALWGADASV VASDDGIVAR IPDTDGKLPD 60 61 AAIFLFEPEK LLQIVREAVG SSALFAARFR ECAARALLMP GRTPGHRTPL WQQRLRASQL 120 121 LEIAQGYPDF PVILETLREC LQDVYDLPAL ERLMRRLNGG EIQISDVTTT TPSPFATSLL 180 181 FGYVAEFMYQ SDAPLAERRA SVLSLDSELL RNLL |
Detection Method: | |
Confidence: | 72.886057 |
Match: | PF08494.2 |
Description: | No description for PF08494.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [906-1007] |
1 11 21 31 41 51 | | | | | | 1 GQVDPGELLD PQVIRQVEEE LQRLAPGRRA KGEEGLFDLL RELGPMTVED LAQRHTGSSE 60 61 EVASYLENLL AVKRIFPAMI SGQERLACMD DAARLRDALG VR |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.383 | a.39.1 | EF-hand |
View | Download | 0.446 | a.1.1 | Globin-like |
View | Download | 0.488 | c.48.1 | TK C-terminal domain-like |
View | Download | 0.426 | d.58.26 | GHMP Kinase, C-terminal domain |
View | Download | 0.403 | a.1.1 | Globin-like |
Region A: Residues: [1008-1114] |
1 11 21 31 41 51 | | | | | | 1 LPESLPEIYL HRVSYPLRDL FLRYLRAHAL VTAEQLAHEF SLGIAIVEEQ LQQLREQGLV 60 61 MNLQQDIWVS DEVFRRLRLR SLQAAREATR PVAATTYARL LLERQGV |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1115-1292] |
1 11 21 31 41 51 | | | | | | 1 LPATDGSPAL FASTSPGVYE GVDGVMRVIE QLAGVGLPAS LWESQILPAR VRDYSSEMLD 60 61 ELLATGAVIW SGQKKLGEDD GLVALHLQEY AAESFTPAEA DQANRSALQQ AIVAVLADGG 120 121 AWFAQQISQR IRDKIGESVD LSALQEALWA LVWQGVITSD IWAPLRALTR SSSNARTS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1293-1538] |
1 11 21 31 41 51 | | | | | | 1 TRRSHRARRG RPVYAQPVSP RVSYNTPNLA GRWSLLQVEP LNDTERMLAL AENMLDRYGI 60 61 ISRQAVIAEN IPGGFPSMQT LCRSMEDSGR IMRGRFVEGL GGAQFAERLT IDRLRDLATQ 120 121 ATQTRHYTPV ALSANDPANV WGNLLPWPAH PATLVPTRRA GALVVVSGGK LLLYLAQGGK 180 181 KMLVWQEKEE LLAPEVFHAL TTALRREPRL RFTLTEVNDL PVRQTPMFTL LREAGFSSSP 240 241 QGLDWG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.